RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 SSTR5P35346 364 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 GLP1RP43220 463 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 REG1BP48304 166 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 MTNR1BP49286 362 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 GNG10P50151 68 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 ZNF134P52741 427 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 ZNF137PP52743 207 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 GNB1P62873 340 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 GNGT1P63211 74 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 IL13RA2Q14627 380 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 KISS1Q15726 138 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 LTC4SQ16873 150 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 PAN3Q58A45 887 aaKnown RBP4.73□□□□□ -1.65
VRK3-220ENST00000600259 KCTD20Q7Z5Y7 419 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 MOB3BQ86TA1 216 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 PARP16Q8N5Y8 322 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 ZNF439Q8NDP4 499 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 OR10H4Q8NGA5 316 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 OR52M1Q8NGK5 317 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 OR1N2Q8NGR9 330 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 OR13C9Q8NGT0 318 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 RTN4IP1Q8WWV3 396 aaPredicted RBP4.73□□□□□ -1.65
VRK3-220ENST00000600259 DLX4Q92988 240 aaPredicted RBP4.73□□□□□ -1.65
VRK3-220ENST00000600259 PELI1Q96FA3 418 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 UBE2E2Q96LR5 201 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 GON7Q9BXV9 100 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 PRRG3Q9BZD7 231 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 BARHL1Q9BZE3 327 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 ZCCHC4Q9H5U6 513 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 GNG8Q9UK08 70 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 POMPQ9Y244 141 aa4.73□□□□□ -1.65
VRK3-220ENST00000600259 A8MZ25 164 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 G3V318 75 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 HSPB6O14558 160 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 SLC31A2O15432 143 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 ATP8B1O43520 1251 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 MOSP00540 346 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 MT-ND4P03905 459 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 OR8U8P0C7N1 319 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 ZNF20P17024 532 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 KCNJ3P48549 501 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 VEGFCP49767 419 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 ZNF616Q08AN1 781 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 BNIP1Q12981 228 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 ALKBH1Q13686 389 aaKnown RBP4.72□□□□□ -1.65
VRK3-220ENST00000600259 GALEQ14376 348 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 PIGYQ3MUY2 71 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 C19orf54Q5BKX5 351 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 CT45A1Q5HYN5 189 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 SLC25A30Q5SVS4 291 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 ZNF691Q5VV52 312 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 ZFAND6Q6FIF0 208 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 ZNF429Q86V71 674 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 SPATA24Q86W54 205 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 MINDY2Q8NBR6 621 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 OR8H1Q8NGG4 311 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 OR8J1Q8NGP2 316 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 OR10X1Q8NGY0 326 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 CT45A3Q8NHU0 189 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 SLC7A6OSQ96CW6 309 aaPredicted RBP4.72□□□□□ -1.65
VRK3-220ENST00000600259 RNFT2Q96EX2 444 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 RITA1Q96K30 269 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 NR1H4Q96RI1 486 aaPredicted RBP4.72□□□□□ -1.65
VRK3-220ENST00000600259 CIB1Q99828 191 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 CHCHD6Q9BRQ6 235 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 GABARAPL1Q9H0R8 117 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 IFT22Q9H7X7 185 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 KRT84Q9NSB2 600 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 C19orf73Q9NVV2 129 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 GFOD1Q9NXC2 390 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 VSIG4Q9Y279 399 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 HYDINQ4G0P3 5121 aa4.72□□□□□ -1.65
VRK3-220ENST00000600259 IGHV7-81A0A0B4J1V7 117 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 E9PI62 339 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 G3V2T6 193 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 GABRPO00591 440 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 OVOL1O14753 267 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 SLC16A6O15403 523 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 SULT1B1O43704 296 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 ORC5O43913 435 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 SOX15O60248 233 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 LY86O95711 162 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 HTR1AP08908 422 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 EGR2P11161 476 aaPredicted RBP4.71□□□□□ -1.66
VRK3-220ENST00000600259 GP9P14770 177 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 SOX6P35712 828 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 RAB9AP51151 201 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 DOC2BQ14184 412 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 FLOT2Q14254 428 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 ATP6AP1Q15904 470 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 ZSCAN26Q16670 478 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 Q3ZCU0 254 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 NHLRC3Q5JS37 347 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 FAM27D1Q5T7N8 215 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 ACSM6Q6P461 480 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 ADAMTSL5Q6ZMM2 481 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 SLC25A48Q6ZT89 311 aaKnown RBP4.71□□□□□ -1.66
VRK3-220ENST00000600259 AMIGO2Q86SJ2 522 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 SERPINA12Q8IW75 414 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 SUMF2Q8NBJ7 301 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms