RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 REC114Q7Z4M0 266 aa15□□□□□ -0.01
PNKP-213ENST00000599543 LYPD6Q86Y78 171 aa15□□□□□ -0.01
PNKP-213ENST00000599543 THRSPQ92748 146 aa15□□□□□ -0.01
PNKP-213ENST00000599543 CREB3L1Q96BA8 519 aa15□□□□□ -0.01
PNKP-213ENST00000599543 S100A13Q99584 98 aa15□□□□□ -0.01
PNKP-213ENST00000599543 GFI1Q99684 422 aa15□□□□□ -0.01
PNKP-213ENST00000599543 BANF2Q9H503 90 aa15□□□□□ -0.01
PNKP-213ENST00000599543 LIN7BQ9HAP6 207 aa15□□□□□ -0.01
PNKP-213ENST00000599543 NDUFB11Q9NX14 153 aa15□□□□□ -0.01
PNKP-213ENST00000599543 AK6Q9Y3D8 172 aaKnown RBP15□□□□□ -0.01
PNKP-213ENST00000599543 SMIM30A4D0T7 59 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 ADARB2-AS1A8MUL3 147 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 SLC33A1O00400 549 aaPredicted RBP14.99□□□□□ -0.01
PNKP-213ENST00000599543 CCRL2O00421 344 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 TOR1AO14656 332 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 DEGS1O15121 323 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 CSTBP04080 98 aaKnown RBP14.99□□□□□ -0.01
PNKP-213ENST00000599543 CD24P25063 80 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 CEACAM3P40198 252 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 TRAM1Q15629 374 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 OXLD1Q5BKU9 147 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 OR5AU1Q8NGC0 362 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 OCSTAMPQ9BR26 566 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 ZNF286AQ9HBT8 521 aa14.99□□□□□ -0.01
PNKP-213ENST00000599543 IGLV1-47P01700 117 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 PSMA1P25786 263 aaKnown RBP14.98□□□□□ -0.01
PNKP-213ENST00000599543 CD34P28906 385 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 GDNFP39905 211 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 RBM39Q14498 530 aaKnown RBP14.98□□□□□ -0.01
PNKP-213ENST00000599543 HLA-DRB5Q30154 266 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 ELP2Q6IA86 826 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 C22orf42Q6IC83 251 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 OR10K2Q6IF99 312 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 OSR2Q8N2R0 312 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 NKAIN3Q8N8D7 197 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 TSPAN14Q8NG11 270 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 PHYHIPQ92561 330 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 FCGR1BQ92637 280 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 FAM46BQ96A09 425 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 COQ2Q96H96 371 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 SLC25A33Q9BSK2 321 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 OR6C3Q9NZP0 311 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 ST3GAL6Q9Y274 331 aa14.98□□□□□ -0.01
PNKP-213ENST00000599543 A0A1W2PRX2 142 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 SHISA3A0PJX4 238 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 ZNF729A6NN14 1252 aaPredicted RBP14.97□□□□□ -0.01
PNKP-213ENST00000599543 BUB1B-PAK6H3BSN5 160 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 GEMIN2O14893 280 aaKnown RBP14.97□□□□□ -0.01
PNKP-213ENST00000599543 CRTAPO75718 401 aaPredicted RBP14.97□□□□□ -0.01
PNKP-213ENST00000599543 OR2F2O95006 317 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 TNFAIP8O95379 198 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 PRRX1P54821 245 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 RBM11P57052 281 aaKnown RBP14.97□□□□□ -0.01
PNKP-213ENST00000599543 P2RY14Q15391 338 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 ABCA11PQ4W5N1 156 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 FBLN7Q53RD9 439 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 CCDC144NLQ6NUI1 221 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 CENPVQ7Z7K6 275 aaPredicted RBP14.97□□□□□ -0.01
PNKP-213ENST00000599543 TMEM104Q8NE00 496 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 OR51E2Q9H255 320 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 IL36GQ9NZH8 169 aa14.97□□□□□ -0.01
PNKP-213ENST00000599543 A0A087X0M5 115 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 TRAV24A0A0B4J272 114 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 A0A1B0GX30 115 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 ARL6IP5O75915 188 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 PF4V1P10720 104 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 NFYBP25208 207 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 MNDAP41218 407 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 GLP1RP43220 463 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 OR10A3P58181 314 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 PAN3Q58A45 887 aaKnown RBP14.96□□□□□ -0.01
PNKP-213ENST00000599543 TPTE2P1Q5T6R2 138 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 GLT8D1Q68CQ7 371 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 Q6ZPA2 131 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 ZNF565Q8N9K5 539 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 Q8NFD4 153 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 OR51T1Q8NGJ9 327 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 RBM14Q96PK6 669 aaKnown RBP14.96□□□□□ -0.01
PNKP-213ENST00000599543 RNF167Q9H6Y7 350 aa14.96□□□□□ -0.01
PNKP-213ENST00000599543 KBTBD11-OT1A0A1B0GTJ5 212 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 TRDV1A0A1B0GX56 115 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 OR7C1O76099 320 aaPredicted RBP14.95□□□□□ -0.02
PNKP-213ENST00000599543 LPLP06858 475 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 CD33P20138 364 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 GADD45AP24522 165 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 CLDN12P56749 244 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 CD83Q01151 205 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 IL13RA2Q14627 380 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 C17orf58Q2M2W7 97 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 ATAD3CQ5T2N8 411 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 CD200R1LQ6Q8B3 271 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 CDH26Q8IXH8 852 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 MRAPQ8TCY5 172 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 UQCC2Q9BRT2 126 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 SELENOIQ9C0D9 397 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 PLGRKTQ9HBL7 147 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 NECAP2Q9NVZ3 263 aa14.95□□□□□ -0.02
PNKP-213ENST00000599543 AMMECR1Q9Y4X0 333 aaPredicted RBP14.95□□□□□ -0.02
PNKP-213ENST00000599543 A0A087WXM4 84 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 MEIKINA0A087WXM9 373 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms