RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	BRS3	P32247	399 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	PTGFR	P43088	359 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	OR3A4P	P47883	348 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	NCS1	P62166	190 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	SPCS2	Q15005	226 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	CDK5R1	Q15078	307 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	TMEM244	Q5VVB8	128 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	FDX2	Q6P4F2	183 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	C18orf65	Q6ZTR6	163 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	ZFP41	Q8N8Y5	198 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	OR4X2	Q8NGF9	303 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	TMEM203	Q969S6	136 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	AKR1E2	Q96JD6	320 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	KCTD7	Q96MP8	289 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	TMED9	Q9BVK6	235 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	TAS2R3	Q9NYW6	316 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	TENM3	Q9P273	2699 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	TRDV1	A0A1B0GX56	115 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	OR4C45	A6NMZ5	311 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	HSPB6	O14558	160 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	SH2D1B	O14796	132 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	CD1A	P06126	327 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	ZP1	P60852	638 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	SCN1B	Q07699	218 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	EGFEM1P	Q0D2K5	195 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	DIAPH2-AS1	Q14236	149 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	RBM39	Q14498	530 aa	Known RBP	11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	C9orf152	Q5JTZ5	239 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	KRBOX4	Q5JUW0	171 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	OR52W1	Q6IF63	320 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	OSR2	Q8N2R0	312 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	OR13C3	Q8NGS6	347 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	CAPSL	Q8WWF8	208 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	LEAP2	Q969E1	77 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	SMIM19	Q96E16	107 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	PELI1	Q96FA3	418 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	RCC1L	Q96I51	464 aa	Known RBP	11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	KIRREL1	Q96J84	757 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223	GLS2	Q9UI32	602 aa		11.64	□□□□□ -0.55
IRF3-223	ENST00000599223		A0A1W2PPI3	338 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	OGG1	O15527	345 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	GPX5	O75715	221 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	IGHV3-7	P01780	117 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	ZNF182	P17025	639 aa	Predicted RBP	11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	FGF9	P31371	208 aa	Predicted RBP	11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	GLP1R	P43220	463 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	RPS25	P62851	125 aa	Known RBP	11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	VAX1	Q5SQQ9	334 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	ZNF329	Q86UD4	541 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	OR13A1	Q8NGR1	328 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	OR56B4	Q8NH76	319 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	THRSP	Q92748	146 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	CENPO	Q9BU64	300 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	NEK6	Q9HC98	313 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	ZNF581	Q9P0T4	197 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	MOB4	Q9Y3A3	225 aa		11.63	□□□□□ -0.55
IRF3-223	ENST00000599223	ZNF729	A6NN14	1252 aa	Predicted RBP	11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	LALBA	P00709	142 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	SNRNP70	P08621	437 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	CGB3	P0DN86	165 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	CGB7	P0DN87	165 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	MYL9	P24844	172 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	NFYB	P25208	207 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	CEACAM3	P40198	252 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	LSAMP	Q13449	338 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	DMKN	Q6E0U4	476 aa	Predicted RBP	11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	C22orf42	Q6IC83	251 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	MRPL41	Q8IXM3	137 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	SAXO1	Q8IYX7	474 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	OR4D6	Q8NGJ1	314 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	OR51T1	Q8NGJ9	327 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	GHSR	Q92847	366 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	NOL4L	Q96MY1	436 aa	Predicted RBP	11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	TXNL4B	Q9NX01	149 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	CCDC59	Q9P031	241 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	KIF25	Q9UIL4	384 aa		11.62	□□□□□ -0.55
IRF3-223	ENST00000599223	TRAV24	A0A0B4J272	114 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FUOM	A2VDF0	154 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	PSMB11	A5LHX3	300 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A18P	A6NE21	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A16P	A6NEW6	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A20P	A6NIJ5	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A9P	A6NNJ1	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A12P	A8MX19	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A5P	A8MXJ8	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	GABRP	O00591	440 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	TOR1A	O14656	332 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	ARL6IP5	O75915	188 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	IL1A	P01583	271 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A15P	P0C7V4	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A13P	P0C7W8	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A14P	P0C7W9	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	FAM90A24P	P0C7X0	464 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	OCM2	P0CE71	109 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	OCM	P0CE72	109 aa	Predicted RBP	11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	MAPK3	P27361	379 aa	Predicted RBP	11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	CCR9	P51686	369 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	ARHGDIB	P52566	201 aa		11.61	□□□□□ -0.55
IRF3-223	ENST00000599223	RPL23A	P62750	156 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms