RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 MRGPRDQ8TDS7 321 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 ZFAND2BQ8WV99 257 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 KCTD12Q96CX2 325 aaKnown RBP14.85□□□□□ -0.03
LIG1-216ENST00000598938 SLC25A38Q96DW6 304 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 ATG5Q9H1Y0 275 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 RHBDL2Q9NX52 303 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 ZNF69Q9UC07 566 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 CEPT1Q9Y6K0 416 aa14.85□□□□□ -0.03
LIG1-216ENST00000598938 A0A0A6YYJ9 748 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 GUCA2AQ02747 115 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 SCGB2A2Q13296 93 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 SPCS2Q15005 226 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 TUSC1Q2TAM9 212 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 HEPN1Q6WQI6 88 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 C12orf54Q6X4T0 127 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 ZNF782Q6ZMW2 699 aaPredicted RBP14.84□□□□□ -0.03
LIG1-216ENST00000598938 OR4K15Q8NH41 348 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 ISOC1Q96CN7 298 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 RAB3CQ96E17 227 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 HEXA-AS1Q9H8Q6 139 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 MBNL3Q9NUK0 354 aaKnown RBP14.84□□□□□ -0.03
LIG1-216ENST00000598938 CALYQ9NYX4 217 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 AK3Q9UIJ7 227 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 SESN1Q9Y6P5 492 aa14.84□□□□□ -0.03
LIG1-216ENST00000598938 NPIPB11E5RHQ5 1161 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 MMP23AO75900 390 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 SCGNO76038 276 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 NAPSAO96009 420 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 HIST1H1DP16402 221 aaKnown RBP14.83□□□□□ -0.04
LIG1-216ENST00000598938 GZMHP20718 246 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 CDK2P24941 298 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 RORCP51449 518 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 UBE2E1P51965 193 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 DYNC1I2Q13409 638 aaKnown RBP14.83□□□□□ -0.04
LIG1-216ENST00000598938 PRAMEF5Q5TYX0 476 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 RUSC1-AS1Q66K80 236 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 BRD3OSQ6XYD6 125 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 PDZD9Q8IXQ8 264 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 CCDC107Q8WV48 283 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 RBM38Q9H0Z9 239 aaKnown RBP14.83□□□□□ -0.04
LIG1-216ENST00000598938 TRAPPC2LQ9UL33 140 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 KCNK7Q9Y2U2 307 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 MEGF8Q7Z7M0 2845 aa14.83□□□□□ -0.04
LIG1-216ENST00000598938 H3BMQ9 156 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 C15orf65H3BRN8 121 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 MFNGO00587 321 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 ORC5O43913 435 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 NOL3O60936 208 aaKnown RBP14.82□□□□□ -0.04
LIG1-216ENST00000598938 SSTR5P35346 364 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 GDNFP39905 211 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 OLFML2AQ68BL7 652 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 ZNF880Q6PDB4 577 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 MS4A7Q9GZW8 240 aaPredicted RBP14.82□□□□□ -0.04
LIG1-216ENST00000598938 TMEM133Q9H2Q1 129 aa14.82□□□□□ -0.04
LIG1-216ENST00000598938 TRBV6-6A0A0A6YYG2 114 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 NPFFO15130 113 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 ZNF182P17025 639 aaPredicted RBP14.81□□□□□ -0.04
LIG1-216ENST00000598938 RCC1P18754 421 aaPredicted RBP14.81□□□□□ -0.04
LIG1-216ENST00000598938 OMGP23515 440 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 FPR2P25090 351 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 C6orf183Q5T699 404 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 OR52W1Q6IF63 320 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 TRAT1Q6PIZ9 186 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 Q6ZPA2 131 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 ZNF554Q86TJ5 538 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 BCL6BQ8N143 479 aaPredicted RBP14.81□□□□□ -0.04
LIG1-216ENST00000598938 PNKDQ8N490 385 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 OR10A7Q8NGE5 316 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 OR13D1Q8NGV5 346 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 ACOT12Q8WYK0 555 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 C22orf15Q8WYQ4 148 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 KIRREL1Q96J84 757 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 HDHD3Q9BSH5 251 aaPredicted RBP14.81□□□□□ -0.04
LIG1-216ENST00000598938 ABCG5Q9H222 651 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 RIMS4Q9H426 269 aaPredicted RBP14.81□□□□□ -0.04
LIG1-216ENST00000598938 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.81□□□□□ -0.04
LIG1-216ENST00000598938 IDI2-AS1Q9NZ38 188 aa14.81□□□□□ -0.04
LIG1-216ENST00000598938 SOX21Q9Y651 276 aaPredicted RBP14.81□□□□□ -0.04
LIG1-216ENST00000598938 MGAM2Q2M2H8 2515 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 A0A087X0M5 115 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 A0A0A6YYH2 397 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 A0A1B0GX30 115 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 A6NJ64 397 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 C12orf77C9JDV5 145 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 GNB3P16520 340 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 COX7A1P24310 79 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 ARL6IP1Q15041 203 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 UBE2NLQ5JXB2 153 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 BAIAP2L2Q6UXY1 529 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 OR11H6Q8NGC7 330 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 RFESDQ8TAC1 157 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 DYNC2LI1Q8TCX1 351 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 ARL11Q969Q4 196 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 SLC6A7Q99884 636 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 CMSS1Q9BQ75 279 aaKnown RBP14.8□□□□□ -0.04
LIG1-216ENST00000598938 SUCNR1Q9BXA5 334 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 CHMP1AQ9HD42 196 aaPredicted RBP14.8□□□□□ -0.04
LIG1-216ENST00000598938 C12orf4Q9NQ89 552 aa14.8□□□□□ -0.04
LIG1-216ENST00000598938 IGHV2-26A0A0B4J1V2 119 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms