RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 JAGN1Q8N5M9 183 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 OR4F17Q8NGA8 305 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 TFAP2CQ92754 450 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 OR4F4Q96R69 305 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 SPACA1Q9HBV2 294 aa18.37■□□□□ 0.53
SSBP4-205ENST00000598159 MRPS28Q9Y2Q9 187 aaKnown RBP18.37■□□□□ 0.53
SSBP4-205ENST00000598159 TRAV39A0A0B4J263 110 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 A0A1W2PP11 408 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 MAGEA13PA6NCF6 341 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 MAS1P04201 325 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 LPLP06858 475 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 SSTR5P35346 364 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 CD83Q01151 205 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 TMEM95Q3KNT9 176 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 GLIPR1L1Q6UWM5 242 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 OR52M1Q8NGK5 317 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 NEK7Q8TDX7 302 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 MUL1Q969V5 352 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 DERL3Q96Q80 235 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 DCLRE1BQ9H816 532 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 FKBP14Q9NWM8 211 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 NOTCH1P46531 2555 aa18.36■□□□□ 0.53
SSBP4-205ENST00000598159 MCRIP1C9JLW8 97 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 ORC5O43913 435 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 MT-ND4P03905 459 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 AMY1AP04745 511 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 AMY2AP04746 511 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 MAPK3P27361 379 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-205ENST00000598159 RNLSQ5VYX0 342 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 OR8H3Q8N146 312 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 OR10X1Q8NGY0 326 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 ARL11Q969Q4 196 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 R3HDM4Q96D70 268 aa18.35■□□□□ 0.53
SSBP4-205ENST00000598159 ADARB2-AS1A8MUL3 147 aa18.34■□□□□ 0.53
SSBP4-205ENST00000598159 C15orf65H3BRN8 121 aa18.34■□□□□ 0.53
SSBP4-205ENST00000598159 GNG10P50151 68 aa18.34■□□□□ 0.53
SSBP4-205ENST00000598159 FBLN7Q53RD9 439 aa18.34■□□□□ 0.53
SSBP4-205ENST00000598159 AWAT2Q6E213 333 aa18.34■□□□□ 0.53
SSBP4-205ENST00000598159 ZNF497Q6ZNH5 498 aa18.34■□□□□ 0.53
SSBP4-205ENST00000598159 CCDC107Q8WV48 283 aa18.34■□□□□ 0.53
SSBP4-205ENST00000598159 FAM90A10PA6NDY2 464 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 FAM90A7PA6NKC0 464 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 FAM90A23PA8MXZ1 464 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 G3V4G9 280 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 PIN1P1O15428 100 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 SNRNP70P08621 437 aaKnown RBP18.33■□□□□ 0.52
SSBP4-205ENST00000598159 LYPD6Q86Y78 171 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 MS4A15Q8N5U1 240 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 DRAM1Q8N682 238 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 NKAIN3Q8N8D7 197 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 OR56B4Q8NH76 319 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 UQCC2Q9BRT2 126 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 RAB9BQ9NP90 201 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 RCC2Q9P258 522 aaKnown RBP18.33■□□□□ 0.52
SSBP4-205ENST00000598159 MOB4Q9Y3A3 225 aa18.33■□□□□ 0.52
SSBP4-205ENST00000598159 A0A1W2PPI3 338 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 ANKRD65E5RJM6 399 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 AIPO00170 330 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 SDCBPO00560 298 aaPredicted RBP18.32■□□□□ 0.52
SSBP4-205ENST00000598159 GAPDHP04406 335 aaKnown RBP18.32■□□□□ 0.52
SSBP4-205ENST00000598159 CDK1P06493 297 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 DIAPH2-AS1Q14236 149 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 BEAN1Q3B7T3 259 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 SAMD5Q5TGI4 173 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 LINC00311Q8N616 119 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 C8orf31Q8N9H6 132 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 MYDGFQ969H8 173 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 MND1Q9BWT6 205 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 GHRLQ9UBU3 117 aa18.32■□□□□ 0.52
SSBP4-205ENST00000598159 GLAP06280 429 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 LOXL3P58215 753 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 ZNF816Q0VGE8 651 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-205ENST00000598159 HES1Q14469 280 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 Q3ZCU0 254 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 C9orf152Q5JTZ5 239 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 C6orf141Q5SZD1 244 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 SYT6Q5T7P8 510 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-205ENST00000598159 UNQ9370/PRO34162Q6UXP9 181 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 SELENOIQ9C0D9 397 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 BANF2Q9H503 90 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 GFOD1Q9NXC2 390 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 SCN3BQ9NY72 215 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 ETAA1Q9NY74 926 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 TRAPPC2LQ9UL33 140 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 PEX16Q9Y5Y5 336 aa18.31■□□□□ 0.52
SSBP4-205ENST00000598159 A0A1W2PPE3 182 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 TCRBV4S1A1TA0A5B7 111 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 PTGES3LE9PB15 166 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 CA11O75493 328 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 MGMTP16455 207 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 TMEM11P17152 192 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 FUT3P21217 361 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 ACSM3Q53FZ2 586 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 KPRPQ5T749 579 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-205ENST00000598159 RAB12Q6IQ22 244 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 OR4X2Q8NGF9 303 aa18.3■□□□□ 0.52
SSBP4-205ENST00000598159 TSSC4Q9Y5U2 329 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-205ENST00000598159 SH2D7A6NKC9 451 aaPredicted RBP18.29■□□□□ 0.52
SSBP4-205ENST00000598159 H0YHG0 523 aa18.29■□□□□ 0.52
SSBP4-205ENST00000598159 CCRL2O00421 344 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms