RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 PEX14O75381 377 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 ARL6IP5O75915 188 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 TFAP2AP05549 437 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 SRMP19623 302 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 SERPINA2P20848 420 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 CDK2P24941 298 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 VDAC2P45880 294 aaPredicted RBP12.13□□□□□ -0.47
TGFB1-202ENST00000597453 GLIPR1P48060 266 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 RBM11P57052 281 aaKnown RBP12.13□□□□□ -0.47
TGFB1-202ENST00000597453 FABP5Q01469 135 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 SCN1BQ07699 218 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 SLC22A6Q4U2R8 563 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 ARSJQ5FYB0 599 aaPredicted RBP12.13□□□□□ -0.47
TGFB1-202ENST00000597453 UTF1Q5T230 341 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 AWAT2Q6E213 333 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 Q6ZPA2 131 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 LINC00596Q86U02 117 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 ABHD12Q8N2K0 398 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 OR4D6Q8NGJ1 314 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 PPIL3Q9H2H8 161 aaKnown RBP12.13□□□□□ -0.47
TGFB1-202ENST00000597453 GAL3ST2Q9H3Q3 398 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 ZNF286AQ9HBT8 521 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 ST3GAL6Q9Y274 331 aa12.13□□□□□ -0.47
TGFB1-202ENST00000597453 TRGV10A0A0A0MS01 117 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 FUOMA2VDF0 154 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 IGLV1-47P01700 117 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 GTF2F2P13984 249 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 CALRP27797 417 aaKnown RBP12.12□□□□□ -0.47
TGFB1-202ENST00000597453 GLT8D1Q68CQ7 371 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 GLIPR1L1Q6UWM5 242 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 HEPN1Q6WQI6 88 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 CORO2AQ92828 525 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 MRPS24Q96EL2 167 aaKnown RBP12.12□□□□□ -0.47
TGFB1-202ENST00000597453 COQ2Q96H96 371 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 ING3Q9NXR8 418 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 DPM3Q9P2X0 92 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 GHRLQ9UBU3 117 aa12.12□□□□□ -0.47
TGFB1-202ENST00000597453 TRAV24A0A0B4J272 114 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 A0A1W2PP11 408 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 ODAMA1E959 279 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 CCRL2O00421 344 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 CD37P11049 281 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 ATXN7L3Q14CW9 347 aaPredicted RBP12.11□□□□□ -0.47
TGFB1-202ENST00000597453 MPV17LQ2QL34 196 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
TGFB1-202ENST00000597453 C1orf100Q5SVJ3 147 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 OR52W1Q6IF63 320 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 CD200R1LQ6Q8B3 271 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 RTN4RL2Q86UN3 420 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 OR4F17Q8NGA8 305 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 OR4F4Q96R69 305 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 RBM38Q9H0Z9 239 aaKnown RBP12.11□□□□□ -0.47
TGFB1-202ENST00000597453 TAS2R3Q9NYW6 316 aa12.11□□□□□ -0.47
TGFB1-202ENST00000597453 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 SH2D7A6NKC9 451 aaPredicted RBP12.1□□□□□ -0.47
TGFB1-202ENST00000597453 HSPB6O14558 160 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 GEMIN2O14893 280 aaKnown RBP12.1□□□□□ -0.47
TGFB1-202ENST00000597453 OR7C1O76099 320 aaPredicted RBP12.1□□□□□ -0.47
TGFB1-202ENST00000597453 UBBP0CG47 229 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 GALP22466 123 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 PSMB9P28065 219 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 CD34P28906 385 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 ALDH3B2P48448 385 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 KCNJ3P48549 501 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 PAX5Q02548 391 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 LSAMPQ13449 338 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 C17orf58Q2M2W7 97 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 TCTEX1D4Q5JR98 221 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 KRBOX4Q5JUW0 171 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 OR5AU1Q8NGC0 362 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 ZNF596Q8TC21 504 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 LIN7BQ9HAP6 207 aa12.1□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A10PA6NDY2 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A18PA6NE21 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A16PA6NEW6 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A20PA6NIJ5 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A7PA6NKC0 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A12PA8MX19 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A5PA8MXJ8 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A23PA8MXZ1 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 LEUTXA8MZ59 168 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 SLC22A1O15245 554 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A15PP0C7V4 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A13PP0C7W8 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A14PP0C7W9 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 FAM90A24PP0C7X0 464 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 MGMTP16455 207 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 BRS3P32247 399 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 CD83Q01151 205 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 HLA-DRB5Q30154 266 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 TPTE2P1Q5T6R2 138 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 C16orf82Q7Z2V1 217 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 SUMF2Q8NBJ7 301 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 TSPAN14Q8NG11 270 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 OR6M1Q8NGM8 313 aa12.09□□□□□ -0.47
TGFB1-202ENST00000597453 PHF21AQ96BD5 680 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms