RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 AK3Q9UIJ7 227 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 SESN1Q9Y6P5 492 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 IGHV3OR16-10A0A075B7F0 116 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 TRAV39A0A0B4J263 110 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 IGHV1-69DA0A0B4J2H0 117 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 CENPVL3A0A0U1RRI6 287 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 SMIM31A0A1B0GVY4 71 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 SERPINE3A8MV23 424 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 RNASEK-C17orf49H0YIS7 233 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 ZNF701M0R085 212 aaPredicted RBP11.75□□□□□ -0.53
VRK3-213ENST00000597215 MFNGO00587 321 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 IGHV1-69P01742 117 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 CGB3P0DN86 165 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 CGB7P0DN87 165 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 GNB3P16520 340 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 EPHA1P21709 976 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 DLX1P56177 255 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 MRPS15P82914 257 aaKnown RBP11.75□□□□□ -0.53
VRK3-213ENST00000597215 KLRD1Q13241 179 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 C17orf58Q2M2W7 97 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 PRAMEF5Q5TYX0 476 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 OR52W1Q6IF63 320 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 MOB1BQ7L9L4 216 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 DYNC2LI1Q8TCX1 351 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 ABCG5Q9H222 651 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 LINC00574Q9H8X3 128 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 RAB9BQ9NP90 201 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 C12orf4Q9NQ89 552 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.75□□□□□ -0.53
VRK3-213ENST00000597215 DIABLOQ9NR28 239 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 MBNL3Q9NUK0 354 aaKnown RBP11.75□□□□□ -0.53
VRK3-213ENST00000597215 NDUFA13Q9P0J0 144 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 COMMD3Q9UBI1 195 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 KCNK7Q9Y2U2 307 aa11.75□□□□□ -0.53
VRK3-213ENST00000597215 A0A075B6Q4 140 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 TRBV6-6A0A0A6YYG2 114 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 ORC5O43913 435 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 NAPSAO96009 420 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 GSTP1P09211 210 aaKnown RBP11.74□□□□□ -0.53
VRK3-213ENST00000597215 CD3GP09693 182 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 SSTR5P35346 364 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 UBE2E1P51965 193 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 PRB3Q04118 309 aaPredicted RBP11.74□□□□□ -0.53
VRK3-213ENST00000597215 OLFML2AQ68BL7 652 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 ZNF554Q86TJ5 538 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 PDZD9Q8IXQ8 264 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 OR13D1Q8NGV5 346 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 ARL11Q969Q4 196 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 S100A16Q96FQ6 103 aaKnown RBP11.74□□□□□ -0.53
VRK3-213ENST00000597215 CMTM3Q96MX0 182 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 MS4A7Q9GZW8 240 aaPredicted RBP11.74□□□□□ -0.53
VRK3-213ENST00000597215 TMEM133Q9H2Q1 129 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 IDI2-AS1Q9NZ38 188 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 KCNIP1Q9NZI2 227 aa11.74□□□□□ -0.53
VRK3-213ENST00000597215 POM121CA8CG34 1229 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 C12orf77C9JDV5 145 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 NPIPB11E5RHQ5 1161 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 SPINT2O43291 252 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 MMP23AO75900 390 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 APOA1P02647 267 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 RCC1P18754 421 aaPredicted RBP11.73□□□□□ -0.53
VRK3-213ENST00000597215 OMGP23515 440 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 COX7A1P24310 79 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 FPR2P25090 351 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 ARFRP1Q13795 201 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 CDNFQ49AH0 187 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 ZNF880Q6PDB4 577 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 BRD3OSQ6XYD6 125 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 C9orf139Q6ZV77 190 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 PNKDQ8N490 385 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 SETD6Q8TBK2 473 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 KIRREL1Q96J84 757 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 HDHD3Q9BSH5 251 aaPredicted RBP11.73□□□□□ -0.53
VRK3-213ENST00000597215 ZMAT3Q9HA38 289 aaKnown RBP11.73□□□□□ -0.53
VRK3-213ENST00000597215 ZNF69Q9UC07 566 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 MGAT4AQ9UM21 535 aa11.73□□□□□ -0.53
VRK3-213ENST00000597215 SETD2Q9BYW2 2564 aaPredicted RBP11.72□□□□□ -0.53
VRK3-213ENST00000597215 TRAV18A0A075B6X5 111 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 C15orf65H3BRN8 121 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 NPFFO15130 113 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 XRCC3O43542 346 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 NFYBP25208 207 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 GDNFP39905 211 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 LTC4SQ16873 150 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 PNLIPRP3Q17RR3 467 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 TMEM30BQ3MIR4 351 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 ZNF260Q3ZCT1 412 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 HACD4Q5VWC8 232 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 RUSC1-AS1Q66K80 236 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 RFESDQ8TAC1 157 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 SUCNR1Q9BXA5 334 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 CLEC7AQ9BXN2 247 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 TAF9BQ9HBM6 251 aa11.72□□□□□ -0.53
VRK3-213ENST00000597215 A0A087X0M5 115 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 IGHV2-26A0A0B4J1V2 119 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 A0A1B0GX30 115 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 A0A1W2PRD5 423 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 A0A1W2PRF3 423 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms