RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 TRAPPC2LQ9UL33 140 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 A0A087X0M5 115 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 A0A1B0GX30 115 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 NPIPB11E5RHQ5 1161 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 ORC5O43913 435 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 NFYBP25208 207 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 QRFPP83859 136 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 FAM189A2Q15884 450 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 NKAPLQ5M9Q1 402 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 LHFPL4Q7Z7J7 247 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 CCDC107Q8WV48 283 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 C17orf50Q8WW18 174 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 ARL11Q969Q4 196 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 FAM3DQ96BQ1 224 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 AJUBAQ96IF1 538 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 KIRREL1Q96J84 757 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 ABCB10Q9NRK6 738 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 TXNL4BQ9NX01 149 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 DPM3Q9P2X0 92 aa14.02□□□□□ -0.17
SHKBP1-212ENST00000596163 UBE2QL1A1L167 161 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 LEUTXA8MZ59 168 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 H3BUX3 64 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 GPR137BO60478 399 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 CEACAM3P40198 252 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 ARHGDIBP52566 201 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 UNC119Q13432 240 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 SSX2Q16385 188 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 C2orf76Q3KRA6 126 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 SIGIRRQ6IA17 410 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 TPRA1Q86W33 373 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 OR51D1Q8NGF3 324 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 OR9G1Q8NH87 305 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 RFESDQ8TAC1 157 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 RAB18Q9NP72 206 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 PLEKHJ1Q9NW61 149 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 KCNIP1Q9NZI2 227 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 FBLN5Q9UBX5 448 aa14.01□□□□□ -0.17
SHKBP1-212ENST00000596163 A0A1B0GUS0 222 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 IFITM5A6NNB3 132 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 VGLL3A8MV65 326 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 SPINT2O43291 252 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 CD36P16671 472 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 CHATP28329 748 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 BLVRBP30043 206 aaPredicted RBP14□□□□□ -0.17
SHKBP1-212ENST00000596163 GDNFP39905 211 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 TMEM30BQ3MIR4 351 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 TIMM50Q3ZCQ8 353 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 HES5Q5TA89 166 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 LIAT1Q6ZQX7 453 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 GAPTQ8N292 157 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 C3orf56Q8N813 242 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 OR52M1Q8NGK5 317 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 OR4F5Q8NH21 305 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 KCTD7Q96MP8 289 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 ZNF696Q9H7X3 374 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 ZNF286AQ9HBT8 521 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 RAB22AQ9UL26 194 aa14□□□□□ -0.17
SHKBP1-212ENST00000596163 AMMECR1Q9Y4X0 333 aaPredicted RBP14□□□□□ -0.17
SHKBP1-212ENST00000596163 TRAV39A0A0B4J263 110 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 NDUFA7O95182 113 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 IGLV1-47P01700 117 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 CFPP27918 469 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 SSTR5P35346 364 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 DYNLT3P51808 116 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 CLDN12P56749 244 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 HLA-DRB5Q30154 266 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 AWAT1Q58HT5 328 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 DHRS7BQ6IAN0 325 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 ZNF554Q86TJ5 538 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 FAM89BQ8N5H3 189 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 DTX3Q8N9I9 347 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 OR56B1Q8NGI3 324 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 OR4P4Q8NGL7 312 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 OR4K15Q8NH41 348 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 LPAR5Q9H1C0 372 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 RIMS4Q9H426 269 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 BEX1Q9HBH7 125 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 PITPNC1Q9UKF7 332 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 HILPDAQ9Y5L2 63 aa13.99□□□□□ -0.17
SHKBP1-212ENST00000596163 SHISA3A0PJX4 238 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 FAM172BPA6NC97 362 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 POM121CA8CG34 1229 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 OOSP1A8MZH6 123 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 BRS3P32247 399 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 OR10A3P58181 314 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 LTC4SQ16873 150 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 BAIAP2L2Q6UXY1 529 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 CHCHD6Q9BRQ6 235 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 NICN1Q9BSH3 213 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 FAAP24Q9BTP7 215 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 MMP28Q9H239 520 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 OR51E2Q9H255 320 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 KCNK15Q9H427 330 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 C1RLQ9NZP8 487 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
SHKBP1-212ENST00000596163 NOTOA8MTQ0 251 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 C15orf65H3BRN8 121 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 BUB1B-PAK6H3BSN5 160 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 J3QR06 171 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms