RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 UBE2UQ5VVX9 321 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 OLFML2AQ68BL7 652 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 GLT8D1Q68CQ7 371 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 RAB12Q6IQ22 244 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM53AQ6NSI3 398 aaPredicted RBP8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 CD200R1LQ6Q8B3 271 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 RTN4RL2Q86UN3 420 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 GAPTQ8N292 157 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 ZNF565Q8N9K5 539 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 RFESDQ8TAC1 157 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 NDNFQ8TB73 568 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 LEAP2Q969E1 77 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 NICN1Q9BSH3 213 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 SLITRK2Q9H156 845 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 Q9H521 79 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 C16orf95Q9H693 158 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 BEX1Q9HBH7 125 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 IDI2-AS1Q9NZ38 188 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 GHRLQ9UBU3 117 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 TCF19Q9Y242 345 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 A0A0A6YYD4 124 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 A0A1B0GUS0 222 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 A6NDX4 124 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 TMEM14DPA8MWL7 114 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 LY6LH3BQJ8 138 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 BUB1B-PAK6H3BSN5 160 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 ARL6IP5O75915 188 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 MPIG6BO95866 241 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 IGHV3-7P01780 117 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 UBBP0CG47 229 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 DYNLT3P51808 116 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 PROK1P58294 105 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 RPS27AP62979 156 aaKnown RBP8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 LTC4SQ16873 150 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 SHISA2Q6UWI4 295 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 TMEM219Q86XT9 240 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 UBALD1Q8TB05 177 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 ZNF596Q8TC21 504 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 NEK7Q8TDX7 302 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 CCDC107Q8WV48 283 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 YTHDF1Q9BYJ9 559 aaKnown RBP8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 CST11Q9H112 138 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 SPACA1Q9HBV2 294 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 DPM3Q9P2X0 92 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 PSG11Q9UQ72 335 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 AK6Q9Y3D8 172 aaKnown RBP8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 PEX16Q9Y5Y5 336 aa8.84□□□□□ -0.99
SHKBP1-206ENST00000595523 TET2Q6N021 2002 aaPredicted RBP8.83□□□□□ -1
SHKBP1-206ENST00000595523 UBE2QL1A1L167 161 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 C12orf77C9JDV5 145 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 MCRIP1C9JLW8 97 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 J3QR06 171 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 AIPO00170 330 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 SLC17A2O00624 439 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 PDCD6O75340 191 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 BPNT1O95861 308 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 FUT3P21217 361 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 CHATP28329 748 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 LOXL3P58215 753 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 P2RY14Q15391 338 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 TPTE2P1Q5T6R2 138 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 Q6ZPA2 131 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 LIAT1Q6ZQX7 453 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 C5orf24Q7Z6I8 188 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 SVOPQ8N4V2 548 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 OR10A7Q8NGE5 316 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 OR6M1Q8NGM8 313 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 OR4K15Q8NH41 348 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 OR9G1Q8NH87 305 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 TM2D1Q9BX74 207 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 TMEM59Q9BXS4 323 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 MMP28Q9H239 520 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 ETAA1Q9NY74 926 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 SIGLEC9Q9Y336 463 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 RNF114Q9Y508 228 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 LRRC42Q9Y546 428 aa8.83□□□□□ -1
SHKBP1-206ENST00000595523 TRDV1A0A1B0GX56 115 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 FOXI3A8MTJ6 420 aaPredicted RBP8.82□□□□□ -1
SHKBP1-206ENST00000595523 LEUTXA8MZ59 168 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 TOR1AO14656 332 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 ORC5O43913 435 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 GLAP06280 429 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 RCC1P18754 421 aaPredicted RBP8.82□□□□□ -1
SHKBP1-206ENST00000595523 GZMHP20718 246 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 CD24P25063 80 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 CLDN12P56749 244 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 OR10A3P58181 314 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 PLA2G7Q13093 441 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 DIAPH2-AS1Q14236 149 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 RBM39Q14498 530 aaKnown RBP8.82□□□□□ -1
SHKBP1-206ENST00000595523 SYT6Q5T7P8 510 aaPredicted RBP8.82□□□□□ -1
SHKBP1-206ENST00000595523 ZNF773Q6PK81 442 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 C6orf201Q7Z4U5 140 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 KCNG3Q8TAE7 436 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 MRPL30Q8TCC3 161 aaKnown RBP8.82□□□□□ -1
SHKBP1-206ENST00000595523 ARL11Q969Q4 196 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 CITED1Q99966 193 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 SULT4A1Q9BR01 284 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 LPAR5Q9H1C0 372 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 PLGRKTQ9HBL7 147 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms