RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 KIAA1324LA8MWY0 1029 aaPredicted RBP11.34□□□□□ -0.59
VRK3-209ENST00000594948 C9J4A7 227 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 CLDN34H7C241 214 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 PPP1R2P9O14990 202 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 CYTIPO60759 359 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 NDUFS6O75380 124 aaKnown RBP11.34□□□□□ -0.59
VRK3-209ENST00000594948 COX5BP10606 129 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 CD200P41217 278 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 PRSS12P56730 875 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 CEACAM21Q3KPI0 293 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 LSM10Q969L4 123 aaKnown RBP11.34□□□□□ -0.59
VRK3-209ENST00000594948 LINC00470Q9BZP3 86 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 CTDSP1Q9GZU7 261 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 TRBV24-1A0A075B6N3 115 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 G3V3Y1 287 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 CYB5BO43169 146 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 CXCL13O43927 109 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 KLF7O75840 302 aaPredicted RBP11.33□□□□□ -0.6
VRK3-209ENST00000594948 CNOT4O95628 575 aaKnown RBP11.33□□□□□ -0.6
VRK3-209ENST00000594948 IGHEP01854 428 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 BCL2P10415 239 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 HIST1H1BP16401 226 aaKnown RBP11.33□□□□□ -0.6
VRK3-209ENST00000594948 PRDX4Q13162 271 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 ZNF880Q6PDB4 577 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 SPNS3Q6ZMD2 512 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 TMEM217Q8N7C4 229 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 OR2Y1Q8NGV0 311 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 SAP25Q8TEE9 199 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 FAM210BQ96KR6 192 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 PFDN5Q99471 154 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 CACNA1EQ15878 2313 aa11.33□□□□□ -0.6
VRK3-209ENST00000594948 TRBV23-1A0A0A0MS06 115 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 IGKV1-6A0A0C4DH72 117 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 NPIPB11E5RHQ5 1161 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 P04436 131 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 CEBPGP53567 150 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 SERF2P84101 59 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 PCSK4Q6UW60 755 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 ZNF600Q6ZNG1 722 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 ZDHHC23Q8IYP9 409 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 ZNF383Q8NA42 475 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 SCGB1C1Q8TD33 95 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 CABLES2Q9BTV7 478 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 TRAPPC2LH3BP13 241 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 IFNA1P01562 189 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 IFNA10P01566 189 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 TRGC2P03986 189 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 OPN1MWP04001 364 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 OPN1MW2P0DN77 364 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 OPN1MW3P0DN78 364 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 PI4KAP42356 2102 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 RPS18P62269 152 aaKnown RBP11.32□□□□□ -0.6
VRK3-209ENST00000594948 TRA2AQ13595 282 aaKnown RBP eCLIP11.32□□□□□ -0.6
VRK3-209ENST00000594948 ZNF324BQ6AW86 544 aaPredicted RBP11.32□□□□□ -0.6
VRK3-209ENST00000594948 ZNF787Q6DD87 383 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 YRDCQ86U90 279 aaKnown RBP11.32□□□□□ -0.6
VRK3-209ENST00000594948 THNSL2Q86YJ6 484 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 ZNF295-AS1Q8N0V1 137 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 OR56B2PQ8NGI1 322 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 OR10D4PQ8NGN7 298 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 OR10D3Q8NH80 312 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 MRPL30Q8TCC3 161 aaKnown RBP11.32□□□□□ -0.6
VRK3-209ENST00000594948 FGF23Q9GZV9 251 aaPredicted RBP11.32□□□□□ -0.6
VRK3-209ENST00000594948 ZNF576Q9H609 170 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 SDF2L1Q9HCN8 221 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 OR2W1Q9Y3N9 320 aa11.32□□□□□ -0.6
VRK3-209ENST00000594948 UNC80Q8N2C7 3258 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 IGKV3D-15A0A087WSY6 115 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 DEGS1O15121 323 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 SS18L1O75177 396 aaPredicted RBP11.31□□□□□ -0.6
VRK3-209ENST00000594948 DEFA6Q01524 100 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 SLC25A24Q6NUK1 477 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 MRGPRGQ86SM5 289 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 CPEB3Q8NE35 698 aaKnown RBP11.31□□□□□ -0.6
VRK3-209ENST00000594948 OR5A2Q8NGI9 324 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 CA5BP1Q8WTZ4 195 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
VRK3-209ENST00000594948 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 STRADBQ9C0K7 418 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 GNG13Q9P2W3 67 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
VRK3-209ENST00000594948 K7ESF4 209 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 PHOX2AO14813 284 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 SOD3P08294 240 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 HAAOP46952 286 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 RAB11AP62491 216 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 OR2T2Q6IF00 324 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 MRPL21Q7Z2W9 205 aaKnown RBP11.3□□□□□ -0.6
VRK3-209ENST00000594948 ZNF525Q8N782 197 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 APOBEC3DQ96AK3 386 aaPredicted RBP11.3□□□□□ -0.6
VRK3-209ENST00000594948 CDH20Q9HBT6 801 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 RPRMQ9NS64 109 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 MTCH1Q9NZJ7 389 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 URGCP-MRPS24S4R325 110 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 A0A0G2JRQ6 117 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms