RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CLEC18AA5D8T8 446 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 K7N7A8 449 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 FABP7O15540 132 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 CLDN1O95832 211 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 LYNX1P0DP58 116 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 PGAM2P15259 253 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 AKR1C4P17516 323 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 COL8A2P25067 703 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 PAX5Q02548 391 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 HFEQ30201 348 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 ZNF660Q6AZW8 331 aaPredicted RBP12.67□□□□□ -0.38
VRK3-207ENST00000594092 CLEC18BQ6UXF7 455 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 ZNF788Q6ZQV5 615 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 MOB1BQ7L9L4 216 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 LYG2Q86SG7 212 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 CLEC18CQ8NCF0 446 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 ADAD2Q8NCV1 583 aaKnown RBP12.67□□□□□ -0.38
VRK3-207ENST00000594092 ZNRF1Q8ND25 227 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 PPP1R35Q8TAP8 253 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 GAFA1Q96PS6 74 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 C5orf66Q9H5L9 145 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 MBNL3Q9NUK0 354 aaKnown RBP12.67□□□□□ -0.38
VRK3-207ENST00000594092 KIF25Q9UIL4 384 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 TRAPPC2LQ9UL33 140 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 MGAT4AQ9UM21 535 aa12.67□□□□□ -0.38
VRK3-207ENST00000594092 C14orf166Q9Y224 244 aaKnown RBP12.67□□□□□ -0.38
VRK3-207ENST00000594092 DCHS2Q6V1P9 2916 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 A0A1B0GW55 424 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 SCTP09683 121 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 CTXN2P0C2S0 81 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 DUX4L2P0CJ85 424 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 DUX4L3P0CJ86 424 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 DUX4L4P0CJ87 422 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 DUX4L5P0CJ88 424 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 DUX4L6P0CJ89 424 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 DUX4L7P0CJ90 424 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 SELLP14151 372 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 ZBTB25P24278 435 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 FCGR2CP31995 323 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 BAMBIQ13145 260 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 PPP1R1AQ13522 171 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 IGSF11Q5DX21 431 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 KRBOX4Q5JUW0 171 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 DUX4L9Q6RFH8 374 aaPredicted RBP12.66□□□□□ -0.38
VRK3-207ENST00000594092 C12orf45Q8N5I9 185 aaPredicted RBP12.66□□□□□ -0.38
VRK3-207ENST00000594092 UXS1Q8NBZ7 420 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 TMEM185AQ8NFB2 350 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 CCL13Q99616 98 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 ZNF436Q9C0F3 470 aaPredicted RBP12.66□□□□□ -0.38
VRK3-207ENST00000594092 ZNF665Q9H7R5 613 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 DUX4Q9UBX2 424 aa12.66□□□□□ -0.38
VRK3-207ENST00000594092 MGST3O14880 152 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 TK1P04183 234 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 PLA2G2AP14555 144 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 GLIPR1P48060 266 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 IL13RA1P78552 427 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 HLA-DRB3P79483 266 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 TLE4Q04727 773 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 HERPUD1Q15011 391 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 TMEM128Q5BJH2 165 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 TPRX1Q8N7U7 411 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 OR2AK2Q8NG84 335 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 NEU4Q8WWR8 484 aaPredicted RBP12.65□□□□□ -0.38
VRK3-207ENST00000594092 TMPRSS13Q9BYE2 586 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 LIME1Q9H400 295 aa12.65□□□□□ -0.38
VRK3-207ENST00000594092 IGKV1-6A0A0C4DH72 117 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 A1L4Q6 167 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 C9orf170A2RU37 121 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 SIGLEC5O15389 551 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 C1QBP02746 253 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 VAMP1P23763 118 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 CD34P28906 385 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 NKX2-5P52952 324 aaPredicted RBP12.65□□□□□ -0.39
VRK3-207ENST00000594092 HERV-K104P61576 105 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 SEC61A1P61619 476 aaKnown RBP12.65□□□□□ -0.39
VRK3-207ENST00000594092 EDDM3AQ14507 147 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 NOXA1Q86UR1 476 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 FAM216BQ8N7L0 139 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 ZFAND1Q8TCF1 268 aa12.65□□□□□ -0.39
VRK3-207ENST00000594092 RTBDNQ9BSG5 229 aaPredicted RBP12.65□□□□□ -0.39
VRK3-207ENST00000594092 NKX6-3A6NJ46 265 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 TNFRSF13BO14836 293 aaPredicted RBP12.64□□□□□ -0.39
VRK3-207ENST00000594092 BET1O15155 118 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 RP2O75695 350 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 LY6HO94772 140 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 DIRAS3O95661 229 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 CTSDP07339 412 aaPredicted RBP12.64□□□□□ -0.39
VRK3-207ENST00000594092 PI3P19957 117 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 CDKN1AP38936 164 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 FXYD4P59646 89 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 DHODHQ02127 395 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 OR5D13Q8NGL4 314 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 OR4A4PQ8NGN8 299 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 TOMM40LQ969M1 308 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 TMEM230Q96A57 120 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 PHB2Q99623 299 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 FXYD6Q9H0Q3 95 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 DNTTIP1Q9H147 329 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms