RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 HLA-GP17693 338 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 IGFBP2P18065 325 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 GLRA1P23415 457 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 CCL8P80075 99 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 ZNF146Q15072 292 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 EFNB3Q15768 340 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 MST1LQ2TV78 715 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 TMEM185AQ8NFB2 350 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 SCGB3A2Q96PL1 93 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 DHRS9Q9BPW9 319 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 RTBDNQ9BSG5 229 aaPredicted RBP11.12□□□□□ -0.63
VRK3-205ENST00000593919 GSX2Q9BZM3 304 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 AUP1Q9Y679 476 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 CRYBG3Q68DQ2 2970 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 CEACAM18A8MTB9 384 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 SFT2D2O95562 160 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 CFHR2P36980 270 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 PMELP40967 661 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 CLEC18BQ6UXF7 455 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 ACP7Q6ZNF0 438 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 OVCH2Q7RTZ1 564 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 PEG10Q86TG7 708 aaKnown RBP11.12□□□□□ -0.63
VRK3-205ENST00000593919 COQ8AQ8NI60 647 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 DIRC2Q96SL1 478 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 CMSS1Q9BQ75 279 aaKnown RBP11.12□□□□□ -0.63
VRK3-205ENST00000593919 GCM1Q9NP62 436 aa11.12□□□□□ -0.63
VRK3-205ENST00000593919 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 DBX1A6NMT0 343 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 SRRM5B3KS81 715 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 B9A039 149 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 HS3ST1O14792 307 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 B3GALNT1O75752 331 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 SPDEFO95238 335 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 ZNF44P15621 663 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 EGR1P18146 543 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 SMIM21Q3B7S5 101 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 SPIN3Q5JUX0 258 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 Q6P435 159 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 MUC15Q8N387 334 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 GCSAMQ8N6F7 178 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 SUMF2Q8NBJ7 301 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 OR10Z1Q8NGY1 313 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 RDH5Q92781 318 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 ZNF2Q9BSG1 426 aaPredicted RBP11.11□□□□□ -0.63
VRK3-205ENST00000593919 IFT22Q9H7X7 185 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 SPACA1Q9HBV2 294 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 DYNLRB1Q9NP97 96 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 OR14J1Q9UGF5 321 aa11.11□□□□□ -0.63
VRK3-205ENST00000593919 RAI1Q7Z5J4 1906 aaPredicted RBP11.11□□□□□ -0.63
VRK3-205ENST00000593919 LOC105371267A0A1B0GV96 52 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 FAM221AA4D161 298 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
VRK3-205ENST00000593919 OR2H2O95918 312 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 CD55P08174 381 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 SLC25A4P12235 298 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 CEBPDP49716 269 aaPredicted RBP11.1□□□□□ -0.63
VRK3-205ENST00000593919 SUPT4H1P63272 117 aaKnown RBP11.1□□□□□ -0.63
VRK3-205ENST00000593919 C21orf62-AS1Q17RA5 79 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 TOR2AQ5JU69 321 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 FIP1L1Q6UN15 594 aaKnown RBP11.1□□□□□ -0.63
VRK3-205ENST00000593919 FAM222BQ8WU58 562 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 ANAPC16Q96DE5 110 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 TREM2Q9NZC2 230 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 ANXA10Q9UJ72 324 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 TNFSF18Q9UNG2 199 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 C14orf166Q9Y224 244 aaKnown RBP11.1□□□□□ -0.63
VRK3-205ENST00000593919 A0A0D9SG52 128 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 SIRPB1O00241 398 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 DEGS1O15121 323 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 ADAP1O75689 374 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 HAND1O96004 215 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 KNG1P01042 644 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 FCGR3AP08637 254 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 TESK1Q15569 626 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 ANKRD55Q3KP44 614 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 ZNF660Q6AZW8 331 aaPredicted RBP11.1□□□□□ -0.63
VRK3-205ENST00000593919 TMEM65Q6PI78 240 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 THAP6Q8TBB0 222 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 NEK7Q8TDX7 302 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 SCARB1Q8WTV0 552 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 VRK1Q99986 396 aaPredicted RBP11.1□□□□□ -0.63
VRK3-205ENST00000593919 SAP30LQ9HAJ7 183 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 KIF25Q9UIL4 384 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 RALYQ9UKM9 306 aaKnown RBP11.1□□□□□ -0.63
VRK3-205ENST00000593919 PPP1R3CQ9UQK1 317 aa11.1□□□□□ -0.63
VRK3-205ENST00000593919 SLC33A1O00400 549 aaPredicted RBP11.09□□□□□ -0.63
VRK3-205ENST00000593919 SH2D1BO14796 132 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 LHBP01229 141 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 TNFRSF1AP19438 455 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 DTYMKP23919 212 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 P2RX3P56373 397 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 Q6ZPA2 131 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 SLC51BQ86UW2 128 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 KCNRGQ8N5I3 272 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 BOLLQ8N9W6 283 aaKnown RBP11.09□□□□□ -0.63
VRK3-205ENST00000593919 Q8TCH9 128 aa11.09□□□□□ -0.63
VRK3-205ENST00000593919 ERGIC1Q969X5 290 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms