RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 SELENOIQ9C0D9 397 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 GHRLQ9UBU3 117 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 PSG11Q9UQ72 335 aa12.24□□□□□ -0.45
TRIM28-203ENST00000593582 LSM2Q9Y333 95 aaKnown RBP12.24□□□□□ -0.45
TRIM28-203ENST00000593582 ERICH4A6NGS2 130 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 MT-ND4P03905 459 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 FAM106CPP0CH98 169 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 MGMTP16455 207 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 VDAC2P45880 294 aaPredicted RBP12.23□□□□□ -0.45
TRIM28-203ENST00000593582 GNG10P50151 68 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 GPR50Q13585 617 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 RAB12Q6IQ22 244 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 UNQ9370/PRO34162Q6UXP9 181 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 ZNF497Q6ZNH5 498 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 LYPD6Q86Y78 171 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 CCDC107Q8WV48 283 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 SGCDQ92629 289 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 ARL11Q969Q4 196 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 RBM14Q96PK6 669 aaKnown RBP12.23□□□□□ -0.45
TRIM28-203ENST00000593582 SLC25A33Q9BSK2 321 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 ANKRD60Q9BZ19 345 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 BANF2Q9H503 90 aa12.23□□□□□ -0.45
TRIM28-203ENST00000593582 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A10PA6NDY2 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A18PA6NE21 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A16PA6NEW6 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A20PA6NIJ5 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A7PA6NKC0 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A12PA8MX19 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A5PA8MXJ8 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A23PA8MXZ1 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 AIPO00170 330 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 RGS10O43665 173 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 ORC5O43913 435 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FBXO24O75426 580 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 OR2F2O95006 317 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A15PP0C7V4 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A13PP0C7W8 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A14PP0C7W9 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 FAM90A24PP0C7X0 464 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 INSL4Q14641 139 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 GLT8D1Q68CQ7 371 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 Q6ZS46 218 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 CEACAM19Q7Z692 300 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 TMEM104Q8NE00 496 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 PHYHIPQ92561 330 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 UFD1Q92890 307 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 CST11Q9H112 138 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 DUSP21Q9H596 190 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 RAB9BQ9NP90 201 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 ETAA1Q9NY74 926 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 PEX16Q9Y5Y5 336 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 WNK1Q9H4A3 2382 aa12.22□□□□□ -0.45
TRIM28-203ENST00000593582 C15orf65H3BRN8 121 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 M0QZK8 103 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 SDCBPO00560 298 aaPredicted RBP12.21□□□□□ -0.45
TRIM28-203ENST00000593582 UBBP0CG47 229 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 HSMCR30P0CW71 290 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 SRMP19623 302 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 FUT3P21217 361 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 HSPA13P48723 471 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 RAB7AP51149 207 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 DEFA6Q01524 100 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 IRF3Q14653 427 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 HSD17B12Q53GQ0 312 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 RBM48Q5RL73 367 aaKnown RBP12.21□□□□□ -0.45
TRIM28-203ENST00000593582 FAM27D1Q5T7N8 215 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 SYT6Q5T7P8 510 aaPredicted RBP12.21□□□□□ -0.45
TRIM28-203ENST00000593582 LIPKQ5VXJ0 399 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 FAM46BQ96A09 425 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 Q96M66 194 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 WNT10AQ9GZT5 417 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 TRAPPC2LQ9UL33 140 aa12.21□□□□□ -0.45
TRIM28-203ENST00000593582 TET2Q6N021 2002 aaPredicted RBP12.2□□□□□ -0.46
TRIM28-203ENST00000593582 SPINT2O43291 252 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 CA11O75493 328 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 GLAP06280 429 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 CD28P10747 220 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 GP2P55259 537 aaKnown RBP12.2□□□□□ -0.46
TRIM28-203ENST00000593582 TMEM95Q3KNT9 176 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 ABCA11PQ4W5N1 156 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 C6orf183Q5T699 404 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 IZUMO2Q6UXV1 221 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 LRRTM1Q86UE6 522 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 OR8H3Q8N146 312 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 DRAM1Q8N682 238 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 OR56B4Q8NH76 319 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 UBALD1Q8TB05 177 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 OCSTAMPQ9BR26 566 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 CCDC90BQ9GZT6 254 aa12.2□□□□□ -0.46
TRIM28-203ENST00000593582 A0A1W2PPE3 182 aa12.19□□□□□ -0.46
TRIM28-203ENST00000593582 A0A1W2PPI3 338 aa12.19□□□□□ -0.46
TRIM28-203ENST00000593582 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
TRIM28-203ENST00000593582 C12orf77C9JDV5 145 aa12.19□□□□□ -0.46
TRIM28-203ENST00000593582 WIPF1O43516 503 aa12.19□□□□□ -0.46
TRIM28-203ENST00000593582 SC5DO75845 299 aa12.19□□□□□ -0.46
TRIM28-203ENST00000593582 MPIG6BO95866 241 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms