RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	GABRA5	P31644	462 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	SSTR5	P35346	364 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	CEACAM3	P40198	252 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	PROK1	P58294	105 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	FABP5	Q01469	135 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	EMX1	Q04741	257 aa	Predicted RBP	13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	HLA-DRB5	Q30154	266 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	OR9G1	Q8NH87	305 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	PITPNC1	Q9UKF7	332 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	RRP15	Q9Y3B9	282 aa	Known RBP	13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622	PEX16	Q9Y5Y5	336 aa		13.22	□□□□□ -0.29
CIRBP-233	ENST00000591622		A6NDX4	124 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	BUB1B-PAK6	H3BSN5	160 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622		H3BUI4	141 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	F2RL2	O00254	374 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	SLC22A1	O15245	554 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	GLA	P06280	429 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	VSIG8	P0DPA2	414 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	FUT3	P21217	361 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	HTR2C	P28335	458 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	SRSF4	Q08170	494 aa	Known RBP	13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	SIGIRR	Q6IA17	410 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	SLC16A12	Q6ZSM3	486 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	OR6M1	Q8NGM8	313 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	OR4C13	Q8NGP0	309 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	CCDC107	Q8WV48	283 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	NPFFR1	Q9GZQ6	430 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	ETAA1	Q9NY74	926 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	FBLN5	Q9UBX5	448 aa		13.21	□□□□□ -0.29
CIRBP-233	ENST00000591622	LY6L	H3BQJ8	138 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622		J3QR06	171 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	AIP	O00170	330 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	ORC5	O43913	435 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	CA11	O75493	328 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	MPIG6B	O95866	241 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	CALR	P27797	417 aa	Known RBP	13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	KIR2DS4	P43632	304 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	SSX1	Q16384	188 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	LTC4S	Q16873	150 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	TPTE2P1	Q5T6R2	138 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	OR10K2	Q6IF99	312 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	TMEM219	Q86XT9	240 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	GAPT	Q8N292	157 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	SVOP	Q8N4V2	548 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	KCNG3	Q8TAE7	436 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	LEAP2	Q969E1	77 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	ARL11	Q969Q4	196 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	GFI1	Q99684	422 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	CITED1	Q99966	193 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	MMP28	Q9H239	520 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	PSG11	Q9UQ72	335 aa		13.2	□□□□□ -0.3
CIRBP-233	ENST00000591622	C15orf65	H3BRN8	121 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	PDCD6	O75340	191 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	IGHV3-7	P01780	117 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	BRS3	P32247	399 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	ARHGDIB	P52566	201 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	KRTAP10-3	P60369	221 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	RPS27A	P62979	156 aa	Known RBP	13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	SPART	Q8N0X7	666 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	DTX3	Q8N9I9	347 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	OR52M1	Q8NGK5	317 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	TMEM59	Q9BXS4	323 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	ZNF696	Q9H7X3	374 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	PLGRKT	Q9HBL7	147 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	NDUFB11	Q9NX14	153 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	TRAPPC2L	Q9UL33	140 aa		13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	AK6	Q9Y3D8	172 aa	Known RBP	13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.19	□□□□□ -0.3
CIRBP-233	ENST00000591622	UBE2QL1	A1L167	161 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	TMEM14DP	A8MWL7	114 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	OOSP1	A8MZH6	123 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	SLC17A2	O00624	439 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	BPNT1	O95861	308 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	QRFP	P83859	136 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	UNC119	Q13432	240 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	PRR31	Q5SQ13	230 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	SYT6	Q5T7P8	510 aa	Predicted RBP	13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	UBE2U	Q5VVX9	321 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	CD200R1L	Q6Q8B3	271 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	OR4K15	Q8NH41	348 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	OR2T6	Q8NHC8	308 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	KCNK15	Q9H427	330 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	SIGLEC9	Q9Y336	463 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	LRRC42	Q9Y546	428 aa		13.18	□□□□□ -0.3
CIRBP-233	ENST00000591622	C12orf77	C9JDV5	145 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	SDCBP	O00560	298 aa	Predicted RBP	13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	ARSB	P15848	533 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	CHAT	P28329	748 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	GNG10	P50151	68 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	EFNB2	P52799	333 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	MADCAM1	Q13477	382 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	P2RY14	Q15391	338 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	NKAPL	Q5M9Q1	402 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	C6orf183	Q5T699	404 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	CCDC144NL	Q6NUI1	221 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	C11orf88	Q6PI97	169 aa		13.17	□□□□□ -0.3
CIRBP-233	ENST00000591622	UBALD1	Q8TB05	177 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms