RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 REG1BP48304 166 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 RBM11P57052 281 aaKnown RBP17.16■□□□□ 0.34
DDX39A-215ENST00000590696 EBI3Q14213 229 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 NHLRC3Q5JS37 347 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 XAF1Q6GPH4 301 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 RPL22L1Q6P5R6 122 aaKnown RBP17.16■□□□□ 0.34
DDX39A-215ENST00000590696 STPG2Q8N412 459 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 COMMD1Q8N668 190 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 OR52N1Q8NH53 320 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 APH1BQ8WW43 257 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 TMEM106AQ96A25 262 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 EAF1Q96JC9 268 aaPredicted RBP17.16■□□□□ 0.34
DDX39A-215ENST00000590696 IL36GQ9NZH8 169 aa17.16■□□□□ 0.34
DDX39A-215ENST00000590696 DNAH9Q9NYC9 4486 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 TMEM30CPA0ZSE6 113 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 NCBP2LA6PVI3 153 aaKnown RBP17.15■□□□□ 0.34
DDX39A-215ENST00000590696 GEMIN2O14893 280 aaKnown RBP17.15■□□□□ 0.34
DDX39A-215ENST00000590696 ZNF93P35789 620 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-215ENST00000590696 CD69Q07108 199 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 CCDC58Q4VC31 144 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 DDI2Q5TDH0 399 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 UBALD1Q8TB05 177 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 ARL11Q969Q4 196 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 P2RX4Q99571 388 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 S100A13Q99584 98 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 FGF20Q9NP95 211 aaPredicted RBP17.15■□□□□ 0.34
DDX39A-215ENST00000590696 TMEM138Q9NPI0 162 aa17.15■□□□□ 0.34
DDX39A-215ENST00000590696 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.15■□□□□ 0.34
DDX39A-215ENST00000590696 KMT2CQ8NEZ4 4911 aaKnown RBP17.15■□□□□ 0.34
DDX39A-215ENST00000590696 C15orf65H3BRN8 121 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 SDCBPO00560 298 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-215ENST00000590696 SERPINA2P20848 420 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 PPP3R1P63098 170 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 ATAD3CQ5T2N8 411 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 TGIF2LXQ8IUE1 241 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 ZNF695Q8IW36 515 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 OR52M1Q8NGK5 317 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 CCDC107Q8WV48 283 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 ORAI1Q96D31 301 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 DUX3Q96PT4 197 aa17.14■□□□□ 0.33
DDX39A-215ENST00000590696 IGHV3-43A0A0B4J1X8 118 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 IGHV3-43DP0DP04 118 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 BDKRB2P30411 391 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 ETV1P50549 477 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 SMN1Q16637 294 aaKnown RBP17.13■□□□□ 0.33
DDX39A-215ENST00000590696 OR2G6Q5TZ20 316 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 FAM53AQ6NSI3 398 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-215ENST00000590696 UNQ9370/PRO34162Q6UXP9 181 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 LINC00596Q86U02 117 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 IZUMO1Q8IYV9 350 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 LINC00311Q8N616 119 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 Q8N6K4 173 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 OR2T10Q8NGZ9 312 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 B9D2Q9BPU9 175 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 ABCG5Q9H222 651 aa17.13■□□□□ 0.33
DDX39A-215ENST00000590696 AP4M1O00189 453 aa17.12■□□□□ 0.33
DDX39A-215ENST00000590696 GPR12P47775 334 aa17.12■□□□□ 0.33
DDX39A-215ENST00000590696 MPV17LQ2QL34 196 aa17.12■□□□□ 0.33
DDX39A-215ENST00000590696 TEX38Q6PEX7 206 aa17.12■□□□□ 0.33
DDX39A-215ENST00000590696 Q8N9W7 124 aa17.12■□□□□ 0.33
DDX39A-215ENST00000590696 NEK7Q8TDX7 302 aa17.12■□□□□ 0.33
DDX39A-215ENST00000590696 LIN7CQ9NUP9 197 aaKnown RBP17.12■□□□□ 0.33
DDX39A-215ENST00000590696 PAK1IP1Q9NWT1 392 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-215ENST00000590696 GFOD1Q9NXC2 390 aa17.12■□□□□ 0.33
DDX39A-215ENST00000590696 SIRT4Q9Y6E7 314 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-215ENST00000590696 A0A1W2PP11 408 aa17.11■□□□□ 0.33
DDX39A-215ENST00000590696 ORC5O43913 435 aa17.11■□□□□ 0.33
DDX39A-215ENST00000590696 WBP4O75554 376 aaKnown RBP17.11■□□□□ 0.33
DDX39A-215ENST00000590696 PNLIPRP3Q17RR3 467 aa17.11■□□□□ 0.33
DDX39A-215ENST00000590696 TMPRSS11AQ6ZMR5 421 aa17.11■□□□□ 0.33
DDX39A-215ENST00000590696 C10orf67Q8IYJ2 551 aa17.11■□□□□ 0.33
DDX39A-215ENST00000590696 C8orf31Q8N9H6 132 aa17.11■□□□□ 0.33
DDX39A-215ENST00000590696 RTN4IP1Q8WWV3 396 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-215ENST00000590696 ST6GALNAC6Q969X2 333 aa17.11■□□□□ 0.33
DDX39A-215ENST00000590696 RAX2Q96IS3 184 aa17.11■□□□□ 0.33
DDX39A-215ENST00000590696 H0YHG0 523 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 AIPO00170 330 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 CCL24O00175 119 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 OGG1O15527 345 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 ZNF780AO75290 641 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-215ENST00000590696 MT-ND4P03905 459 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 RPLP1P05386 114 aaKnown RBP17.1■□□□□ 0.33
DDX39A-215ENST00000590696 GTF2F2P13984 249 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 IL3RAP26951 378 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 DCKP27707 260 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 CD1BP29016 333 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 RAB25P57735 213 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 RIPK1Q13546 671 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 SLC22A6Q4U2R8 563 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 ZNF497Q6ZNH5 498 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 LCNL1Q6ZST4 164 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 TMEM104Q8NE00 496 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 OR13C5Q8NGS8 318 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 ZNF184Q99676 751 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-215ENST00000590696 GON7Q9BXV9 100 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 DCLRE1BQ9H816 532 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 BABAM2Q9NXR7 383 aa17.1■□□□□ 0.33
DDX39A-215ENST00000590696 ZMAT5Q9UDW3 170 aaKnown RBP17.1■□□□□ 0.33
DDX39A-215ENST00000590696 ZNF736B4DX44 427 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-215ENST00000590696 MOSP00540 346 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms