RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 RAP2BP61225 183 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 SEC61A1P61619 476 aaKnown RBP14.19□□□□□ -0.14
GCDH-212ENST00000590530 BAMBIQ13145 260 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 KCNJ8Q15842 424 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 FAM209AQ5JX71 171 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 LPCAT3Q6P1A2 487 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 C20orf204Q6ZNR8 217 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 DEFB108BQ8NET1 73 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 OR4A4PQ8NGN8 299 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 ZFAND1Q8TCF1 268 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 Q8TCH9 128 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 CCL17Q92583 94 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 ZNF486Q96H40 463 aaPredicted RBP14.19□□□□□ -0.14
GCDH-212ENST00000590530 HYLS1Q96M11 299 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 SPOCK3Q9BQ16 436 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 PIPOXQ9P0Z9 390 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 RNF7Q9UBF6 113 aa14.19□□□□□ -0.14
GCDH-212ENST00000590530 IGKV1D-17A0A075B6S4 117 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 A0A1B0GW55 424 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 SMLR1H3BR10 107 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 J3QKU1 62 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 DUX4L2P0CJ85 424 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 DUX4L3P0CJ86 424 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 DUX4L4P0CJ87 422 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 DUX4L5P0CJ88 424 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 DUX4L6P0CJ89 424 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 DUX4L7P0CJ90 424 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 PSG2P11465 335 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 TESK1Q15569 626 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 IGSF11Q5DX21 431 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 SP5Q6BEB4 398 aaPredicted RBP14.18□□□□□ -0.14
GCDH-212ENST00000590530 DUX4L9Q6RFH8 374 aaPredicted RBP14.18□□□□□ -0.14
GCDH-212ENST00000590530 PHB2Q99623 299 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 CABLES2Q9BTV7 478 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 DUX4Q9UBX2 424 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 SLC23A1Q9UHI7 598 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 CRYBG3Q68DQ2 2970 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 AKAP6Q13023 2319 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 A0A0B4J2A0 478 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 GOSR2O14653 212 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 SFT2D2O95562 160 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 TK1P04183 234 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 SCTP09683 121 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 ZNF728P0DKX0 622 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 HLA-GP17693 338 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 TNFRSF1AP19438 455 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 VAMP1P23763 118 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 COL8A2P25067 703 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 PAX5Q02548 391 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 HERPUD1Q15011 391 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 C2orf68Q2NKX9 166 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 DTX2Q86UW9 622 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 MBNL3Q9NUK0 354 aaKnown RBP14.18□□□□□ -0.14
GCDH-212ENST00000590530 SHPKQ9UHJ6 478 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 WIPI2Q9Y4P8 454 aa14.18□□□□□ -0.14
GCDH-212ENST00000590530 TMEM30CPA0ZSE6 113 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 NPIPB11E5RHQ5 1161 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 NDUFS7O75251 213 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 SLC22A5O76082 557 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 DIRAS3O95661 229 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 RPS2P15880 293 aaKnown RBP14.17□□□□□ -0.14
GCDH-212ENST00000590530 PI3P19957 117 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 CDKN1AP38936 164 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 HERV-K104P61576 105 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 ATXN7L3Q14CW9 347 aaPredicted RBP14.17□□□□□ -0.14
GCDH-212ENST00000590530 SLC35E4Q6ICL7 350 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 OR5M8Q8NGP6 311 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 EGLN1Q9GZT9 426 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 CLEC4MQ9H2X3 399 aaPredicted RBP14.17□□□□□ -0.14
GCDH-212ENST00000590530 PCDHB10Q9UN67 800 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 DYSFO75923 2080 aa14.17□□□□□ -0.14
GCDH-212ENST00000590530 TRAV39A0A0B4J263 110 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 G3V3Q6 166 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 TUSC2O75896 110 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 PPYP01298 95 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 SELLP14151 372 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 AADACP22760 399 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 OR3A1P47881 315 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 PPOXP50336 477 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 H2BFSP57053 126 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 SUPT4H1P63272 117 aaKnown RBP14.16□□□□□ -0.14
GCDH-212ENST00000590530 COL10A1Q03692 680 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 C11orf88Q6PI97 169 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 SLC38A6Q8IZM9 456 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 UXS1Q8NBZ7 420 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 OR2T35Q8NGX2 323 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 TMPRSS13Q9BYE2 586 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 DNAJB11Q9UBS4 358 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 OPN4Q9UHM6 478 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 USP9YO00507 2555 aaPredicted RBP14.16□□□□□ -0.14
GCDH-212ENST00000590530 IGKV1-6A0A0C4DH72 117 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 FAM172BPA6NC97 362 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 DBX1A6NMT0 343 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 TMEM178BH3BS89 294 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 RCC1P18754 421 aaPredicted RBP14.16□□□□□ -0.14
GCDH-212ENST00000590530 PRDX2P32119 198 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 SRSF4Q08170 494 aaKnown RBP14.16□□□□□ -0.14
GCDH-212ENST00000590530 HMGN3Q15651 99 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 LY6G6FQ5SQ64 297 aa14.16□□□□□ -0.14
GCDH-212ENST00000590530 OR11L1Q8NGX0 322 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms