RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 Q499Y3 187 aa13.35□□□□□ -0.27
CROCCP3-203ENST00000589964 ATAD3CQ5T2N8 411 aa13.35□□□□□ -0.27
CROCCP3-203ENST00000589964 ZNF329Q86UD4 541 aa13.35□□□□□ -0.27
CROCCP3-203ENST00000589964 RPEQ96AT9 228 aa13.35□□□□□ -0.27
CROCCP3-203ENST00000589964 PHF21AQ96BD5 680 aa13.35□□□□□ -0.27
CROCCP3-203ENST00000589964 NCOR1P1Q9H4R4 102 aa13.35□□□□□ -0.27
CROCCP3-203ENST00000589964 FKBP14Q9NWM8 211 aa13.35□□□□□ -0.27
CROCCP3-203ENST00000589964 MRPS28Q9Y2Q9 187 aaKnown RBP13.35□□□□□ -0.27
CROCCP3-203ENST00000589964 GPX5O75715 221 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 MAS1P04201 325 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 BRS3P32247 399 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 PRRX1P54821 245 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 TTC23Q5W5X9 447 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 GLIPR1L1Q6UWM5 242 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 ZNF497Q6ZNH5 498 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 JAGN1Q8N5M9 183 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 PACRGLQ8N7B6 248 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 C5orf56Q8N8D9 126 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 BPIFB6Q8NFQ5 453 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 OR4K15Q8NH41 348 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 OR1L1Q8NH94 360 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 NRG4Q8WWG1 115 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 BARHL1Q9BZE3 327 aa13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 RCC2Q9P258 522 aaKnown RBP13.34□□□□□ -0.27
CROCCP3-203ENST00000589964 TMEM30CPA0ZSE6 113 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 C12orf77C9JDV5 145 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 CASQ2O14958 399 aaPredicted RBP13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 PEX14O75381 377 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 IGKV1D-33P01593 117 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 IGKV1-33P01594 117 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 CELP19835 753 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 CEACAM3P40198 252 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 GNMTQ14749 295 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 YIF1BQ5BJH7 314 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 OR10K2Q6IF99 312 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 ETV3LQ6ZN32 361 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 ARL11Q969Q4 196 aa13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.28
CROCCP3-203ENST00000589964 TCRBV4S1A1TA0A5B7 111 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 RCC1P18754 421 aaPredicted RBP13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 ZNF134P52741 427 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 MADCAM1Q13477 382 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 LCNL1Q6ZST4 164 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 C16orf82Q7Z2V1 217 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 CENPVQ7Z7K6 275 aaPredicted RBP13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 C8orf59Q8N0T1 100 aaPredicted RBP13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 ZNF565Q8N9K5 539 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 ZNF439Q8NDP4 499 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 SETD9Q8NE22 299 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 OR10V1Q8NGI7 309 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 HAVCR2Q8TDQ0 301 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 NEK7Q8TDX7 302 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 ST6GALNAC6Q969X2 333 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 FAM46BQ96A09 425 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 AURKAIP1Q9NWT8 199 aaPredicted RBP13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 GFOD1Q9NXC2 390 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 MOB4Q9Y3A3 225 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 HSPE1-MOB4S4R3N1 261 aa13.32□□□□□ -0.28
CROCCP3-203ENST00000589964 IRGMA1A4Y4 181 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 EFCAB10A6NFE3 127 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 OOSP1A8MZH6 123 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 SDCBPO00560 298 aaPredicted RBP13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 HSD17B6O14756 317 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 CSTBP04080 98 aaKnown RBP13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 TMEM11P17152 192 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 HES1Q14469 280 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 FOXB2Q5VYV0 432 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 LRRTM1Q86UE6 522 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 Q8N6K4 173 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 NANOGP1Q8N7R0 232 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 TFAP2CQ92754 450 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 CPNE2Q96FN4 548 aaPredicted RBP13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 PLCXD1Q9NUJ7 323 aa13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 CNOT2Q9NZN8 540 aaKnown RBP13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 LSM2Q9Y333 95 aaKnown RBP13.31□□□□□ -0.28
CROCCP3-203ENST00000589964 IGHV1-3A0A0C4DH29 117 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 UBE2QL1A1L167 161 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 AIPO00170 330 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 GTF2F2P13984 249 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 MGMTP16455 207 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 MNDAP41218 407 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 KCNJ3P48549 501 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 WNT4P56705 351 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 KRTAP10-11P60412 298 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 EMX1Q04741 257 aaPredicted RBP13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 MPV17LQ2QL34 196 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 CT45A1Q5HYN5 189 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 KHDC1LQ5JSQ8 128 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 AWAT2Q6E213 333 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 RAB12Q6IQ22 244 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 CCDC144NLQ6NUI1 221 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 MOB3BQ86TA1 216 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 OR4F17Q8NGA8 305 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 OR10X1Q8NGY0 326 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 CT45A3Q8NHU0 189 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 EAF1Q96JC9 268 aaPredicted RBP13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 Q96M66 194 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 OR4F4Q96R69 305 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 SELENOIQ9C0D9 397 aa13.3□□□□□ -0.28
CROCCP3-203ENST00000589964 AMMECR1Q9Y4X0 333 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms