RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	RNASE10	Q5GAN6	216 aa	Known RBP	13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR2T2	Q6IF00	324 aa		13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	ZDHHC23	Q8IYP9	409 aa		13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	CHST4	Q8NCG5	386 aa		13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	S100PBP	Q96BU1	408 aa		13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	AKR1E2	Q96JD6	320 aa		13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	URM1	Q9BTM9	101 aa	Known RBP	13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	RNF126	Q9BV68	326 aa		13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	PRDM13	Q9H4Q3	707 aa		13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	HEATR1	Q9H583	2144 aa	Known RBP	13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	ATRX	P46100	2492 aa		13.14	□□□□□ -0.31
DDX39A-209	ENST00000589318	GAPDH	P04406	335 aa	Known RBP	13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	HIST1H1D	P16402	221 aa	Known RBP	13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	RAB4A	P20338	218 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	BMP5	P22003	454 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	DDT	P30046	118 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	OPRM1	P35372	400 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	TIMM23B	Q5SRD1	257 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	ADAM5	Q6NVV9	412 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	SLC25A40	Q8TBP6	338 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318		Q96M66	194 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	METTL9	Q9H1A3	318 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	PRORY	Q9H606	182 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	ELL3	Q9HB65	397 aa	Predicted RBP	13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	RAB18	Q9NP72	206 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	IL36G	Q9NZH8	169 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	SPTA1	P02549	2419 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	ITPR1	Q14643	2758 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318		M0QYG6	137 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	SNRNP70	P08621	437 aa	Known RBP	13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	LPAR6	P43657	344 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	KLRB1	Q12918	225 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	KIAA0141	Q14154	515 aa	Predicted RBP	13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	FAM189A2	Q15884	450 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	SCGB2B2	Q4G0G5	96 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	FJX1	Q86VR8	437 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	ARL6IP6	Q8N6S5	226 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR51T1	Q8NGJ9	327 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR5P3	Q8WZ94	311 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	ARHGAP5-AS1	Q96IT6	56 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	NEU1	Q99519	415 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	SLC6A7	Q99884	636 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	RSRP1	Q9BUV0	290 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	FN3KRP	Q9HA64	309 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	TAF9B	Q9HBM6	251 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	SH3BGRL2	Q9UJC5	107 aa		13.13	□□□□□ -0.31
DDX39A-209	ENST00000589318	PCNX1	Q96RV3	2341 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	SFTPB	P07988	381 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	PAX1	P15863	534 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	SULT1A1	P50225	295 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	GPM6A	P51674	278 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	RSU1	Q15404	277 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	ZNF611	Q8N823	705 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR5A2	Q8NGI9	324 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	MARS2	Q96GW9	593 aa	Known RBP	13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	SLC5A7	Q9GZV3	580 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	MPC1	Q9Y5U8	109 aa		13.12	□□□□□ -0.31
DDX39A-209	ENST00000589318	hCG_1809904	A0A1W2PP81	198 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318		A0A1W2PR64	198 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318		A0A1W2PRV1	198 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	ANKRD30BL	A7E2S9	258 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318		M0R036	132 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	LY86	O95711	162 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	GSTP1	P09211	210 aa	Known RBP	13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	RAC2	P15153	192 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	CCKAR	P32238	428 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	SERPINF1	P36955	418 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	FAM27E3	Q08E93	113 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	DAZAP2	Q15038	168 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	ALKBH6	Q3KRA9	238 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	NCMAP	Q5T1S8	102 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	HEPN1	Q6WQI6	88 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	MRGPRG	Q86SM5	289 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR13D1	Q8NGV5	346 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	RAB24	Q969Q5	203 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	ZNF581	Q9P0T4	197 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	NBEA	Q8NFP9	2946 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	ZNF732	B4DXR9	585 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	JTB	O76095	146 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	CSTB	P04080	98 aa	Known RBP	13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	BLVRB	P30043	206 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	MPV17	P39210	176 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	RBPJ	Q06330	500 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	PSG7	Q13046	419 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	C22orf34	Q6ZV56	151 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	SLC25A26	Q70HW3	274 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	TRAPPC6B	Q86SZ2	158 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	GVQW1	Q8N7I0	195 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318		Q8NFD4	153 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR51F2	Q8NH61	342 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	KLF14	Q8TD94	323 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	JKAMP	Q9P055	326 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	ANAPC10	Q9UM13	185 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	MEMO1	Q9Y316	297 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318	POLE	Q07864	2286 aa		13.11	□□□□□ -0.31
DDX39A-209	ENST00000589318		A0A087X0M5	115 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms