RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 UCP3P55916 312 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 PIGPP57054 158 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 SELENOVP59797 346 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 FGL1Q08830 312 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 SMIM21Q3B7S5 101 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 PHLDA2Q53GA4 152 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 SHEQ5VZ18 495 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 ZNF880Q6PDB4 577 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 TMEM108Q6UXF1 575 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 ZNF497Q6ZNH5 498 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 C20orf204Q6ZNR8 217 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 MOB1BQ7L9L4 216 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 ZNF565Q8N9K5 539 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 BOLLQ8N9W6 283 aaKnown RBP7.39□□□□□ -1.23
SMAD4-206ENST00000588860 CCDC71LQ8N9Z2 235 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 ST6GALNAC3Q8NDV1 305 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 OR4A4PQ8NGN8 299 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 RSRP1Q9BUV0 290 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 MRPL37Q9BZE1 423 aaKnown RBP7.39□□□□□ -1.23
SMAD4-206ENST00000588860 NAA60Q9H7X0 242 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 TMEM165Q9HC07 324 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 RAB18Q9NP72 206 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 DECR2Q9NUI1 292 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 RDH8Q9NYR8 311 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 SPENQ96T58 3664 aaKnown RBP7.39□□□□□ -1.23
SMAD4-206ENST00000588860 HCFC1P51610 2035 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 UTP20O75691 2785 aaKnown RBP7.38□□□□□ -1.23
SMAD4-206ENST00000588860 IGLV3-9A0A075B6K5 115 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 TRAV39A0A0B4J263 110 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 IGKV1-6A0A0C4DH72 117 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 DPRXA6NFQ7 191 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 HMSDA8MTL9 139 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 M0R233 179 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 ABCD4O14678 606 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 ADAP1O75689 374 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 SNAPC5O75971 98 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 PTBP3O95758 552 aaKnown RBP7.38□□□□□ -1.23
SMAD4-206ENST00000588860 TFF1P04155 84 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 HOXB5P09067 269 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 CTXN2P0C2S0 81 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 EGR1P18146 543 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 RCC1P18754 421 aaPredicted RBP7.38□□□□□ -1.23
SMAD4-206ENST00000588860 PTAFRP25105 342 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 CA7P43166 264 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 ASCL1P50553 236 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 HOXA4Q00056 320 aaPredicted RBP7.38□□□□□ -1.23
SMAD4-206ENST00000588860 BSPH1Q075Z2 132 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 OPCMLQ14982 345 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 HERPUD1Q15011 391 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 NDUFA5Q16718 116 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 LRRC37A5PQ49AS3 106 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 ZNF767PQ75MW2 155 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 SSX8Q7RTT4 187 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 MOGAT3Q86VF5 341 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 NUP37Q8NFH4 326 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 OR8H1Q8NGG4 311 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 OR11L1Q8NGX0 322 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 OR10Z1Q8NGY1 313 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 SECTM1Q8WVN6 248 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 ITLN1Q8WWA0 313 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 MRPL24Q96A35 216 aaKnown RBP7.38□□□□□ -1.23
SMAD4-206ENST00000588860 MEGF10Q96KG7 1140 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 OR2V2Q96R30 315 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 SLC5A7Q9GZV3 580 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 METTL8Q9H825 291 aaKnown RBP7.38□□□□□ -1.23
SMAD4-206ENST00000588860 RASL12Q9NYN1 266 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 TREM2Q9NZC2 230 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 TRAPPC2LQ9UL33 140 aa7.38□□□□□ -1.23
SMAD4-206ENST00000588860 BOD1L1Q8NFC6 3051 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 TMEM30CPA0ZSE6 113 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 FAM90A27PA6NNH2 459 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 POM121CA8CG34 1229 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 CCL21O00585 134 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 HSD17B6O14756 317 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 PSPNO60542 156 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 TUSC2O75896 110 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 SLC25A4P12235 298 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 TNFAIP6P98066 277 aaPredicted RBP7.37□□□□□ -1.23
SMAD4-206ENST00000588860 COL10A1Q03692 680 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 SPRNQ5BIV9 151 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 TMUB2Q71RG4 321 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 OR10J5Q8NHC4 309 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 THAP6Q8TBB0 222 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 PPP1R1CQ8WVI7 109 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 RTN4IP1Q8WWV3 396 aaPredicted RBP7.37□□□□□ -1.23
SMAD4-206ENST00000588860 IL1F10Q8WWZ1 152 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 KIRREL1Q96J84 757 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 WFIKKN1Q96NZ8 548 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 CABLES2Q9BTV7 478 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 NMES1Q9C002 83 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 SLC2A9Q9NRM0 540 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 KCNIP1Q9NZI2 227 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 DNAJB11Q9UBS4 358 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 PCDHB10Q9UN67 800 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 KCNIP3Q9Y2W7 256 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 WIPI2Q9Y4P8 454 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 BSNQ9UPA5 3926 aa7.37□□□□□ -1.23
SMAD4-206ENST00000588860 IGHV3OR15-7A0A075B7D8 119 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 TRBV6-7A0A0A0MS04 114 aa7.36□□□□□ -1.23
SMAD4-206ENST00000588860 IGKV1D-13A0A0B4J2D9 117 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms