RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 DUX4L7P0CJ90 424 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 SELLP14151 372 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 SEC61A1P61619 476 aaKnown RBP18.54■□□□□ 0.56
ATG4D-209ENST00000588857 HLA-DRB3P79483 266 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 DUX4L9Q6RFH8 374 aaPredicted RBP18.54■□□□□ 0.56
ATG4D-209ENST00000588857 RAB1CQ92928 201 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 LURAP1Q96LR2 239 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 C20orf85Q9H1P6 137 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 MBNL3Q9NUK0 354 aaKnown RBP18.54■□□□□ 0.56
ATG4D-209ENST00000588857 DUX4Q9UBX2 424 aa18.54■□□□□ 0.56
ATG4D-209ENST00000588857 PPIHO43447 177 aaKnown RBP18.53■□□□□ 0.56
ATG4D-209ENST00000588857 SCTP09683 121 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 CTXN2P0C2S0 81 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 H2AFB2P0C5Z0 115 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 P2RX3P56373 397 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 EDDM3BP56851 147 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 MUC20Q8N307 709 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-209ENST00000588857 TPRX1Q8N7U7 411 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 OR4A4PQ8NGN8 299 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 OR6F1Q8NGZ6 308 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 TERB2Q8NHR7 220 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 TACC2O95359 2948 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 DSCAML1Q8TD84 2053 aa18.53■□□□□ 0.56
ATG4D-209ENST00000588857 TNFRSF13BO14836 293 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-209ENST00000588857 IGHV2-70P01814 119 aa18.52■□□□□ 0.56
ATG4D-209ENST00000588857 GLP1RP43220 463 aa18.52■□□□□ 0.56
ATG4D-209ENST00000588857 KRTAP10-9P60411 292 aa18.52■□□□□ 0.56
ATG4D-209ENST00000588857 IGSF11Q5DX21 431 aa18.52■□□□□ 0.56
ATG4D-209ENST00000588857 C6orf183Q5T699 404 aa18.52■□□□□ 0.56
ATG4D-209ENST00000588857 IGFBPL1Q8WX77 278 aa18.52■□□□□ 0.56
ATG4D-209ENST00000588857 KAAG1Q9UBP8 84 aa18.52■□□□□ 0.56
ATG4D-209ENST00000588857 ODAMA1E959 279 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 NDUFB3O43676 98 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 NDUFS7O75251 213 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 ERP29P30040 261 aaKnown RBP18.51■□□□□ 0.55
ATG4D-209ENST00000588857 TMEM33P57088 247 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 RAB25P57735 213 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 CARTPTQ16568 116 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 LYPD2Q6UXB3 125 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 TAF9BQ9HBM6 251 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 SLC25A10Q9UBX3 287 aaPredicted RBP18.51■□□□□ 0.55
ATG4D-209ENST00000588857 FLVCR2Q9UPI3 526 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 ARPC1BO15143 372 aaKnown RBP18.51■□□□□ 0.55
ATG4D-209ENST00000588857 BET1O15155 118 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 DHFRP00374 187 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 NDUFB7P17568 137 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 LRRC10Q5BKY1 277 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 AVPI1Q5T686 147 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 TRAT1Q6PIZ9 186 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 PRR18Q8N4B5 295 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 ZNF565Q8N9K5 539 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 OR13C8Q8NGS7 320 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 MRGPRDQ8TDS7 321 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 ZNF2Q9BSG1 426 aaPredicted RBP18.51■□□□□ 0.55
ATG4D-209ENST00000588857 NCOR1P1Q9H4R4 102 aa18.51■□□□□ 0.55
ATG4D-209ENST00000588857 RLN1P04808 185 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 RAG2P55895 527 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 HMGN3Q15651 99 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 DHRS11Q6UWP2 260 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 C5orf24Q7Z6I8 188 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 IL1F10Q8WWZ1 152 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 KIRREL1Q96J84 757 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 OR6C3Q9NZP0 311 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 PCDHB10Q9UN67 800 aa18.5■□□□□ 0.55
ATG4D-209ENST00000588857 DOCK11Q5JSL3 2073 aa18.49■□□□□ 0.55
ATG4D-209ENST00000588857 GZMHP20718 246 aa18.49■□□□□ 0.55
ATG4D-209ENST00000588857 FCGR2CP31995 323 aa18.49■□□□□ 0.55
ATG4D-209ENST00000588857 ZNF554Q86TJ5 538 aa18.49■□□□□ 0.55
ATG4D-209ENST00000588857 LHFPL1Q86WI0 220 aa18.49■□□□□ 0.55
ATG4D-209ENST00000588857 OR13A1Q8NGR1 328 aa18.49■□□□□ 0.55
ATG4D-209ENST00000588857 OR10J5Q8NHC4 309 aa18.49■□□□□ 0.55
ATG4D-209ENST00000588857 CREBBPQ92793 2442 aa18.48■□□□□ 0.55
ATG4D-209ENST00000588857 C12orf77C9JDV5 145 aa18.48■□□□□ 0.55
ATG4D-209ENST00000588857 PEX14O75381 377 aa18.48■□□□□ 0.55
ATG4D-209ENST00000588857 NPY4RP50391 375 aa18.48■□□□□ 0.55
ATG4D-209ENST00000588857 HERPUD1Q15011 391 aa18.48■□□□□ 0.55
ATG4D-209ENST00000588857 ZNF660Q6AZW8 331 aaPredicted RBP18.48■□□□□ 0.55
ATG4D-209ENST00000588857 SCGB3A2Q96PL1 93 aa18.48■□□□□ 0.55
ATG4D-209ENST00000588857 TMPRSS13Q9BYE2 586 aa18.48■□□□□ 0.55
ATG4D-209ENST00000588857 CSMD2Q7Z408 3487 aa18.48■□□□□ 0.55
ATG4D-209ENST00000588857 IGKV1-6A0A0C4DH72 117 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 DVL1O14640 695 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 IL2RGP31785 369 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 TATDN3Q17R31 274 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 TMEM155Q4W5P6 130 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 ZDHHC22Q8N966 263 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 MARCH1Q8TCQ1 289 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 GIMAP1Q8WWP7 306 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 MRGPRFQ96AM1 343 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 GALMQ96C23 342 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 DCTN5Q9BTE1 182 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 CABLES2Q9BTV7 478 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 CTSZQ9UBR2 303 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 TRGV10A0A0A0MS01 117 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 OR5H14A6NHG9 310 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 CEACAM18A8MTB9 384 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 SPINT2O43291 252 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 DIRAS3O95661 229 aa18.47■□□□□ 0.55
ATG4D-209ENST00000588857 RPS2P15880 293 aaKnown RBP18.47■□□□□ 0.55
ATG4D-209ENST00000588857 NFYAP23511 347 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms