RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TOMM5Q8N4H5 51 aa18.72■□□□□ 0.59
ACTN4-210ENST00000588618 DCTN5Q9BTE1 182 aa18.72■□□□□ 0.59
ACTN4-210ENST00000588618 GZMHP20718 246 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 ARPC4P59998 168 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 C11orf91Q3C1V1 193 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 ZNF880Q6PDB4 577 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 PRR18Q8N4B5 295 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 RAB9BQ9NP90 201 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 C19orf12Q9NSK7 152 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 MBNL3Q9NUK0 354 aaKnown RBP18.71■□□□□ 0.59
ACTN4-210ENST00000588618 LINC00312Q9Y6C7 94 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 FLNBO75369 2602 aaKnown RBP18.71■□□□□ 0.59
ACTN4-210ENST00000588618 A0A1W2PPH5 198 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 FOXH1O75593 365 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 SRSF7Q16629 238 aaKnown RBP eCLIP18.71■□□□□ 0.597e-6■□□□□ 9.3
ACTN4-210ENST00000588618 CHRFAM7AQ494W8 412 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 LYSMD2Q8IV50 215 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 OR13A1Q8NGR1 328 aa18.71■□□□□ 0.59
ACTN4-210ENST00000588618 LOC105371242A0A075B767 164 aa18.7■□□□□ 0.58
ACTN4-210ENST00000588618 ZNF736B4DX44 427 aaPredicted RBP18.7■□□□□ 0.58
ACTN4-210ENST00000588618 HLA-DMAP28067 261 aa18.7■□□□□ 0.58
ACTN4-210ENST00000588618 TAS2R19P59542 299 aa18.7■□□□□ 0.58
ACTN4-210ENST00000588618 TCF23Q7RTU1 214 aa18.7■□□□□ 0.58
ACTN4-210ENST00000588618 ANXA10Q9UJ72 324 aa18.7■□□□□ 0.58
ACTN4-210ENST00000588618 UBE2J1Q9Y385 318 aaPredicted RBP18.7■□□□□ 0.58
ACTN4-210ENST00000588618 PRRC2AP48634 2157 aaKnown RBP18.7■□□□□ 0.58
ACTN4-210ENST00000588618 ANKRD20A5PA0PJZ0 165 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 TRDCB7Z8K6 153 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 SPINT2O43291 252 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 NAT1P18440 290 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 TAS2R46P59540 309 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 HLA-DRB3P79483 266 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 KLF9Q13886 244 aaPredicted RBP18.69■□□□□ 0.58
ACTN4-210ENST00000588618 KRTAP1-3Q8IUG1 177 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 REG4Q9BYZ8 158 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 GAL3ST2Q9H3Q3 398 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 TAF9BQ9HBM6 251 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 ZNF107Q9UII5 783 aaPredicted RBP18.69■□□□□ 0.58
ACTN4-210ENST00000588618 RPUSD1Q9UJJ7 312 aaKnown RBP18.69■□□□□ 0.58
ACTN4-210ENST00000588618 YLPM1P49750 1951 aaKnown RBP18.69■□□□□ 0.58
ACTN4-210ENST00000588618 LINC00854A0A1B0GVQ3 168 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 RNF223E7ERA6 249 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 IL2RGP31785 369 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 OR3A3P47888 321 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 LCN2P80188 198 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 Q6ZS49 121 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 ZNF554Q86TJ5 538 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 ARL11Q969Q4 196 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 ZNF714Q96N38 554 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 ITGB1BP2Q9UKP3 347 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 TBC1D24Q9ULP9 559 aa18.69■□□□□ 0.58
ACTN4-210ENST00000588618 SVEP1Q4LDE5 3571 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 PPIAL4CA0A0B4J2A2 164 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 FABP7O15540 132 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 PPIAL4GP0DN37 164 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 DCTN2Q13561 401 aaKnown RBP18.68■□□□□ 0.58
ACTN4-210ENST00000588618 ACTBL2Q562R1 376 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 TMEM200BQ69YZ2 307 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 TMEM229BQ8NBD8 167 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 OR5H2Q8NGV7 314 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 IL1F10Q8WWZ1 152 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 CORO2AQ92828 525 aa18.68■□□□□ 0.58
ACTN4-210ENST00000588618 ZNF729A6NN14 1252 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-210ENST00000588618 A8MXK9 166 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 PLA2G10O15496 165 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 SSTR5P35346 364 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 FAUP35544 74 aaKnown RBP18.67■□□□□ 0.58
ACTN4-210ENST00000588618 LOXL1Q08397 574 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-210ENST00000588618 ZNF273Q14593 569 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 FAAP20Q6NZ36 180 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 WFDC11Q8NEX6 87 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 OR5AP2Q8NGF4 316 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 OR4D10Q8NGI6 311 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 OR4A4PQ8NGN8 299 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 UBALD1Q8TB05 177 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 GALMQ96C23 342 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 COX4I2Q96KJ9 171 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 TAS2R3Q9NYW6 316 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 OPN4Q9UHM6 478 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 NOTCH2Q04721 2471 aa18.67■□□□□ 0.58
ACTN4-210ENST00000588618 ZANQ9Y493 2812 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 C12orf77C9JDV5 145 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 ENSAO43768 121 aaKnown RBP18.66■□□□□ 0.58
ACTN4-210ENST00000588618 CD3DP04234 171 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 LIPFP07098 398 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 SCTP09683 121 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 GSTT2P0CG29 244 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 HRH1P35367 487 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 HMGN3Q15651 99 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 CR1LQ2VPA4 569 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 RNASE10Q5GAN6 216 aaKnown RBP18.66■□□□□ 0.58
ACTN4-210ENST00000588618 STEAP1BQ6NZ63 245 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 C8orf46Q8TAG6 207 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 KIRREL1Q96J84 757 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 LPAR2Q9HBW0 351 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 NECAP2Q9NVZ3 263 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 CALYQ9NYX4 217 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 ITPR3Q14573 2671 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 KBTBD11-OT1A0A1B0GTJ5 212 aa18.66■□□□□ 0.58
ACTN4-210ENST00000588618 C22orf46C9J442 243 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms