RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 CD84Q9UIB8 345 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 ZNF225Q9UK10 706 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 SCML1Q9UN30 329 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 PSG8Q9UQ74 426 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 ZNF257Q9Y2Q1 563 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 WIF1Q9Y5W5 379 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 USH1CQ9Y6N9 552 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 POLQO75417 2590 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 AHCTF1Q8WYP5 2266 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 PARP14Q460N5 1801 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 NLRC5Q86WI3 1866 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 RAI1Q7Z5J4 1906 aaPredicted RBP2.07□□□□□ -2.08
VPS4B-203ENST00000588323 ABCA2Q9BZC7 2435 aa2.07□□□□□ -2.08
VPS4B-203ENST00000588323 COL12A1Q99715 3063 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 PCNX2A6NKB5 2137 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 SDK1Q7Z5N4 2213 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 NAV3Q8IVL0 2385 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 A0A0J9YXV3 536 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 A0A1B0GTI1 187 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 FAM240AA0A1B0GVK7 77 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 PLAC8L1A1L4L8 177 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 LINC01619G3V211 115 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 KLRC4-KLRK1H3BQV0 150 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 M0QXV9 152 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 M0R036 132 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 M0R1B8 84 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 EMC8O43402 210 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 CST8O60676 142 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ADAP1O75689 374 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 UPK1BO75841 260 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ACTL6AO96019 429 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 GP1BAP07359 652 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 CTXN2P0C2S0 81 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 SLC35G6P0C7Q6 338 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 PSKH1P11801 424 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 HLA-DMAP28067 261 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 CD52P31358 61 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TGFBR2P37173 567 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 CTRLP40313 264 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 MAGEA3P43357 314 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 CDK9P50750 372 aaKnown RBP2.06□□□□□ -2.08
VPS4B-203ENST00000588323 CDKN2DP55273 166 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TAS2R46P59540 309 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ACTBP60709 375 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ACTG1P63261 375 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 FLI1Q01543 452 aaPredicted RBP2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TPBGQ13641 420 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 GINS1Q14691 196 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 GUSBP1Q15486 140 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ZBTB6Q15916 424 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 EXOC3L4Q17RC7 722 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TMEM183BQ1AE95 376 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TEX30Q5JUR7 227 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 HACD4Q5VWC8 232 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ZNF544Q6NX49 715 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 LYPD2Q6UXB3 125 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 LRRN1Q6UXK5 716 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 C4orf22Q6V702 233 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 IL34Q6ZMJ4 242 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 IDO2Q6ZQW0 420 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 FAM19A1Q7Z5A9 133 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TMEM25Q86YD3 366 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 GID4Q8IVV7 300 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 BBS7Q8IWZ6 715 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TMEM183AQ8IXX5 376 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 PRSS58Q8IYP2 241 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 BOD1L2Q8IYS8 172 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 STK40Q8N2I9 435 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 C12orf29Q8N999 325 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 DCAF4L2Q8NA75 395 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 UBAC2Q8NBM4 344 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TMEM35BQ8NCS4 154 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 GPR26Q8NDV2 337 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ZNF738Q8NE65 137 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 DEFB124Q8NES8 71 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 OR2L5Q8NG80 312 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 OR2D3Q8NGH3 330 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 OR6X1Q8NH79 312 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 NEK7Q8TDX7 302 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 PHF10Q8WUB8 498 aaKnown RBP2.06□□□□□ -2.08
VPS4B-203ENST00000588323 CPNE4Q96A23 557 aaPredicted RBP2.06□□□□□ -2.08
VPS4B-203ENST00000588323 PACRGQ96M98 296 aaPredicted RBP2.06□□□□□ -2.08
VPS4B-203ENST00000588323 MBOAT7Q96N66 472 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 RDH12Q96NR8 316 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 OR2M2Q96R28 347 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 C20orf144Q9BQM9 153 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 SULT4A1Q9BR01 284 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TOLLIPQ9H0E2 274 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 PARP12Q9H0J9 701 aaKnown RBP2.06□□□□□ -2.08
VPS4B-203ENST00000588323 METTL9Q9H1A3 318 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ARV1Q9H2C2 271 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 SPNS1Q9H2V7 528 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ZNF442Q9H7R0 627 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ISYNA1Q9NPH2 558 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 ACOT13Q9NPJ3 140 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 SLC2A9Q9NRM0 540 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 PLSCR3Q9NRY6 295 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 FGFR1OP2Q9NVK5 253 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 TAS2R9Q9NYW1 312 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms