RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 COL27A1Q8IZC6 1860 aaPredicted RBP3.33□□□□□ -1.88
TUBD1-208ENST00000588009 TENM4Q6N022 2769 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 SCN1AP35498 2009 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 IGKV1-6A0A0C4DH72 117 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 LOC389332A0A1B0GUA5 103 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 UPK2O00526 184 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 FABP7O15540 132 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 MAS1P04201 325 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 MUC1P15941 1255 aaPredicted RBP3.33□□□□□ -1.88
TUBD1-208ENST00000588009 NELFEP18615 380 aaKnown RBP3.33□□□□□ -1.88
TUBD1-208ENST00000588009 PLTPP55058 493 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 TMEM249Q2WGJ8 235 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 ACTBL2Q562R1 376 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 CLLU1OSQ5K130 101 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 MORN3Q6PF18 240 aaPredicted RBP3.33□□□□□ -1.88
TUBD1-208ENST00000588009 FAM231DQ6ZW35 169 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 ACTL9Q8TC94 416 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 BIRC8Q96P09 236 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 HBEGFQ99075 208 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 SDHCQ99643 169 aaPredicted RBP3.33□□□□□ -1.88
TUBD1-208ENST00000588009 PITX2Q99697 317 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 LHX5Q9H2C1 402 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 PARP11Q9NR21 331 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 FBXO6Q9NRD1 293 aaPredicted RBP3.33□□□□□ -1.88
TUBD1-208ENST00000588009 C1orf109Q9NX04 203 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 OPN4Q9UHM6 478 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 PUS1Q9Y606 427 aaKnown RBP eCLIP3.33□□□□□ -1.88
TUBD1-208ENST00000588009 ELP1O95163 1332 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 CCNB3Q8WWL7 1395 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF609O15014 1411 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 SMG6Q86US8 1419 aaKnown RBP3.33□□□□□ -1.88
TUBD1-208ENST00000588009 C4BP0C0L5 1744 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 FBN2P35556 2912 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 UBR3Q6ZT12 1888 aa3.33□□□□□ -1.88
TUBD1-208ENST00000588009 IGKV2D-24A0A075B6R9 120 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 IGHV1-3A0A0C4DH29 117 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 A0A1B0GXF2 115 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 NPY1RP25929 384 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 TSPOP30536 169 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 ACOT2P49753 483 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 BNIP2Q12982 314 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 LINC00303Q3SY05 128 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF404Q494X3 552 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 Q499Y3 187 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 FAM222AQ5U5X8 452 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 USP50Q70EL3 339 aaPredicted RBP3.32□□□□□ -1.88
TUBD1-208ENST00000588009 TRMT10CQ7L0Y3 403 aaKnown RBP3.32□□□□□ -1.88
TUBD1-208ENST00000588009 PDPNQ86YL7 162 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF101Q8IZC7 436 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 OR2Z1Q8NG97 314 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF420Q8TAQ5 688 aaPredicted RBP3.32□□□□□ -1.88
TUBD1-208ENST00000588009 FAM57AQ8TBR7 257 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 FMC1Q96HJ9 113 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 C8orf76Q96K31 380 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 MARVELD1Q9BSK0 173 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 HDHD2Q9H0R4 259 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 MFSD1Q9H3U5 465 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 TAS2R13Q9NYV9 303 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 MYO3BQ8WXR4 1341 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 NSD3Q9BZ95 1437 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 BAZ2AQ9UIF9 1905 aaKnown RBP3.32□□□□□ -1.88
TUBD1-208ENST00000588009 SVILO95425 2214 aa3.32□□□□□ -1.88
TUBD1-208ENST00000588009 EP300Q09472 2414 aaPredicted RBP3.32□□□□□ -1.88
TUBD1-208ENST00000588009 NBEAQ8NFP9 2946 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 ALPK3Q96L96 1907 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 NRCAMQ92823 1304 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 A8MWL6 223 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 AQP9O43315 295 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF324O75467 553 aaPredicted RBP3.31□□□□□ -1.88
TUBD1-208ENST00000588009 OR2A4O95047 310 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 MPZL1O95297 269 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 M6PRP20645 277 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 LGALS7P47929 136 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 CCL23P55773 120 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 UBE2G2P60604 165 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 ELF3P78545 371 aaPredicted RBP3.31□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF816Q0VGE8 651 aaPredicted RBP3.31□□□□□ -1.88
TUBD1-208ENST00000588009 SHISA6Q6ZSJ9 500 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 FAM183BPQ6ZVS7 135 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 ITPRIPQ8IWB1 547 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 SLC26A10Q8NG04 563 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 OR5AK3PQ8NH89 298 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 FAM45AQ8TCE6 357 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 CCL17Q92583 94 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 TNFRSF14Q92956 283 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 MRAP2Q96G30 205 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 GPR82Q96P67 336 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 OR2A7Q96R45 310 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 SND1-IT1Q9HBX3 110 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 ASCL3Q9NQ33 180 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 MYO9BQ13459 2157 aa3.31□□□□□ -1.88
TUBD1-208ENST00000588009 PLXNA3P51805 1871 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 TAF1LQ8IZX4 1826 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 KIAA1671Q9BY89 1806 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 ADGRB1O14514 1584 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 ABCA2Q9BZC7 2435 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 CPDO75976 1380 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 C1orf232A0A0U1RR37 186 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 S100A6P06703 90 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 SNRPAP09012 282 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms