RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 MARS2Q96GW9 593 aaKnown RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 CMSS1Q9BQ75 279 aaKnown RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 ZNF665Q9H7R5 613 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 IFT22Q9H7X7 185 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 ZNF286AQ9HBT8 521 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 TAAR3PQ9P1P4 343 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 OPN4Q9UHM6 478 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 PURGQ9UJV8 347 aaKnown RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 FBXO9Q9UK97 447 aaPredicted RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 MGAT4AQ9UM21 535 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 KCNK7Q9Y2U2 307 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 PIGBOS1A0A0B4J2F0 54 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 KIR2DS1A0A191URI9 304 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 A0A1B0GWJ7 208 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 PLSCR5A0PG75 271 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 MEIS3P1A6NDR6 274 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 CEACAM18A8MTB9 384 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 MCRIP1C9JLW8 97 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 BOLA2-SMG1P6H3BVE0 249 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 SSX5O60225 188 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 OR7C1O76099 320 aaPredicted RBP6.53□□□□□ -1.36
VMP1-204ENST00000587259 RLN1P04808 185 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 CA6P23280 308 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 ZFP36P26651 326 aaKnown RBP6.53□□□□□ -1.36
VMP1-204ENST00000587259 ERP29P30040 261 aaKnown RBP6.53□□□□□ -1.36
VMP1-204ENST00000587259 KIR2DS4P43632 304 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 SNU13P55769 128 aaKnown RBP6.53□□□□□ -1.36
VMP1-204ENST00000587259 TSPAN5P62079 268 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 SRSF4Q08170 494 aaKnown RBP6.53□□□□□ -1.36
VMP1-204ENST00000587259 PSG7Q13046 419 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 KIR2DS1Q14954 304 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 TAF9Q16594 264 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 NKPD1Q17RQ9 610 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 SCGB2B2Q4G0G5 96 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 NKAPLQ5M9Q1 402 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 ATAD3CQ5T2N8 411 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 HAGHLQ6PII5 290 aaPredicted RBP6.53□□□□□ -1.36
VMP1-204ENST00000587259 Q6ZS49 121 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 MOB1BQ7L9L4 216 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 SPICQ8N5J4 248 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 SIGLECL1Q8N7X8 197 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 OR10AD1Q8NGE0 317 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 PPA2Q9H2U2 334 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 OR51I2Q9H344 312 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 MS4A5Q9H3V2 200 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 POFUT1Q9H488 388 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 RANBP3Q9H6Z4 567 aaPredicted RBP6.53□□□□□ -1.36
VMP1-204ENST00000587259 NECAP2Q9NVZ3 263 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 DCAF16Q9NXF7 216 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 RCC2Q9P258 522 aaKnown RBP6.53□□□□□ -1.36
VMP1-204ENST00000587259 WNK2Q9Y3S1 2297 aa6.53□□□□□ -1.36
VMP1-204ENST00000587259 IGHV3OR16-10A0A075B7F0 116 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 TRAV20A0A0B4J274 112 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 IGKV1-12A0A0C4DH73 117 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 A6NJY4 79 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 M0QYG6 137 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 GEMIN2O14893 280 aaKnown RBP6.52□□□□□ -1.37
VMP1-204ENST00000587259 NOS1APO75052 506 aaPredicted RBP6.52□□□□□ -1.37
VMP1-204ENST00000587259 IGKV1D-12P01611 117 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 IGHV2-5P01817 119 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 C1QBP02746 253 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 SFTPBP07988 381 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 FCGR3AP08637 254 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 CTXN2P0C2S0 81 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 ZNF735P0CB33 412 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 SULT1A3P0DMM9 295 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 SULT1A4P0DMN0 295 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 ZNF250P15622 560 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 CD33P20138 364 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 BCL3P20749 454 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 C4BPBP20851 252 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 TNFSF4P23510 183 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 FPR2P25090 351 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 GLP1RP43220 463 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 KCNJ3P48549 501 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 TMEM33P57088 247 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 KLF3P57682 345 aaPredicted RBP6.52□□□□□ -1.37
VMP1-204ENST00000587259 SEC61A1P61619 476 aaKnown RBP6.52□□□□□ -1.37
VMP1-204ENST00000587259 CD83Q01151 205 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 IKZF1Q13422 519 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 MPPED2Q15777 294 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 PIGYQ3MUY2 71 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 MIDNQ504T8 468 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 C4orf46Q504U0 113 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 SPATA46Q5T0L3 261 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 DCAF12L2Q5VW00 463 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 FAAP20Q6NZ36 180 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 C6orf201Q7Z4U5 140 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 FAM58AQ8N1B3 248 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 TERB2Q8NHR7 220 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 ZNF431Q8TF32 576 aaPredicted RBP6.52□□□□□ -1.37
VMP1-204ENST00000587259 SLAMF9Q96A28 289 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 ST6GAL2Q96JF0 529 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 DIRC2Q96SL1 478 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 ZNF747Q9BV97 191 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 SUCNR1Q9BXA5 334 aa6.52□□□□□ -1.37
VMP1-204ENST00000587259 TINAGL1Q9GZM7 467 aaPredicted RBP6.52□□□□□ -1.37
VMP1-204ENST00000587259 TLNRD1Q9H1K6 362 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms