RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 URM1Q9BTM9 101 aaKnown RBP8.81□□□□□ -1
CLIP3-203ENST00000586457 YTHDF1Q9BYJ9 559 aaKnown RBP8.81□□□□□ -1
CLIP3-203ENST00000586457 PRSS22Q9GZN4 317 aa8.81□□□□□ -1
CLIP3-203ENST00000586457 TRAV39A0A0B4J263 110 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 BUB1B-PAK6H3BSN5 160 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 M0QZ24 198 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 TIMM23O14925 209 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 DENRO43583 198 aaKnown RBP8.8□□□□□ -1
CLIP3-203ENST00000586457 ORC5O43913 435 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 CA11O75493 328 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 BPNT1O95861 308 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 IGHV3-7P01780 117 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 MT-ND4P03905 459 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 GLAP06280 429 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 UCHL1P09936 223 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 FAM106CPP0CH98 169 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 ARSBP15848 533 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 MYL9P24844 172 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 IL3RAP26951 378 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 GNG10P50151 68 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 RPS25P62851 125 aaKnown RBP8.8□□□□□ -1
CLIP3-203ENST00000586457 RELBQ01201 579 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 MADCAM1Q13477 382 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 TBCEQ15813 527 aaPredicted RBP8.8□□□□□ -1
CLIP3-203ENST00000586457 RAB11BQ15907 218 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 C17orf58Q2M2W7 97 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 FAM27D1Q5T7N8 215 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 SYT6Q5T7P8 510 aaPredicted RBP8.8□□□□□ -1
CLIP3-203ENST00000586457 Q6ZTK2 550 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 TOMM40LQ969M1 308 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 KIRREL1Q96J84 757 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 TMEM59Q9BXS4 323 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 MMP28Q9H239 520 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 C16orf95Q9H693 158 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 ZNF286AQ9HBT8 521 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 CHMP1AQ9HD42 196 aaPredicted RBP8.8□□□□□ -1
CLIP3-203ENST00000586457 PLEKHJ1Q9NW61 149 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 GNG12Q9UBI6 72 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 TCF19Q9Y242 345 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 RRP15Q9Y3B9 282 aaKnown RBP8.8□□□□□ -1
CLIP3-203ENST00000586457 AK6Q9Y3D8 172 aaKnown RBP8.8□□□□□ -1
CLIP3-203ENST00000586457 LRRC42Q9Y546 428 aa8.8□□□□□ -1
CLIP3-203ENST00000586457 OOSP1A8MZH6 123 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 J3QR06 171 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 PDCD6O75340 191 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 TSPAN9O75954 239 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 VSIG10L2P0DP72 767 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 PSMB9P28065 219 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 CD34P28906 385 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 SSTR5P35346 364 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 KIR2DS4P43632 304 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 DYNLT3P51808 116 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 MRPS15P82914 257 aaKnown RBP8.79□□□□□ -1
CLIP3-203ENST00000586457 PAX5Q02548 391 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 EMX1Q04741 257 aaPredicted RBP8.79□□□□□ -1
CLIP3-203ENST00000586457 HES1Q14469 280 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 HLA-DRB5Q30154 266 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 TPTE2P1Q5T6R2 138 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 ZNF497Q6ZNH5 498 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 LRRTM1Q86UE6 522 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 TMEM219Q86XT9 240 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 DYNAPQ8N1N2 210 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 TMEM104Q8NE00 496 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 OR4P4Q8NGL7 312 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 OR4K15Q8NH41 348 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 SETD6Q8TBK2 473 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 WFDC12Q8WWY7 111 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 FCGR1BQ92637 280 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 LEAP2Q969E1 77 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 AJUBAQ96IF1 538 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 RANBP3Q9H6Z4 567 aaPredicted RBP8.79□□□□□ -1
CLIP3-203ENST00000586457 ABRACLQ9P1F3 81 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 FBLN5Q9UBX5 448 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 PSG11Q9UQ72 335 aa8.79□□□□□ -1
CLIP3-203ENST00000586457 TENM1Q9UKZ4 2725 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 A0A087X0M5 115 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 A0A1B0GX30 115 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 NPIPB11E5RHQ5 1161 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 CCRL2O00421 344 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 IGLV1-47P01700 117 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 GAPDHP04406 335 aaKnown RBP8.78□□□□□ -1
CLIP3-203ENST00000586457 BLVRBP30043 206 aaPredicted RBP8.78□□□□□ -1
CLIP3-203ENST00000586457 GDNFP39905 211 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 RAB7AP51149 207 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 FABP5Q01469 135 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 P2RY14Q15391 338 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 TMEM30BQ3MIR4 351 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 C1orf100Q5SVJ3 147 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 OR10K2Q6IF99 312 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 BAIAP2L2Q6UXY1 529 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 OR52M1Q8NGK5 317 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 Q96M66 194 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 V9GY05 133 aa8.78□□□□□ -1
CLIP3-203ENST00000586457 A6NDX4 124 aa8.77□□□□□ -1.01
CLIP3-203ENST00000586457 SLC17A2O00624 439 aa8.77□□□□□ -1.01
CLIP3-203ENST00000586457 SLC22A1O15245 554 aa8.77□□□□□ -1.01
CLIP3-203ENST00000586457 SC5DO75845 299 aa8.77□□□□□ -1.01
CLIP3-203ENST00000586457 RGS11O94810 467 aa8.77□□□□□ -1.01
CLIP3-203ENST00000586457 CGB3P0DN86 165 aa8.77□□□□□ -1.01
CLIP3-203ENST00000586457 CGB7P0DN87 165 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms