RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ZNF649Q9BS31 505 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 DIMT1Q9UNQ2 313 aaKnown RBP11.86□□□□□ -0.51
VAPA-209ENST00000585042 DHDHQ9UQ10 334 aa11.86□□□□□ -0.51
VAPA-209ENST00000585042 TENM3Q9P273 2699 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 CCRL2O00421 344 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 RAMP3O60896 148 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 HOXD3P31249 432 aaPredicted RBP11.85□□□□□ -0.51
VAPA-209ENST00000585042 HSPA13P48723 471 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 RSU1Q15404 277 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 NHLRC3Q5JS37 347 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 TEX38Q6PEX7 206 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 SLC35E3Q7Z769 313 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 OR10X1Q8NGY0 326 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 WWC2-AS2Q96NR7 200 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 GPER1Q99527 375 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 ISG20L2Q9H9L3 353 aaKnown RBP11.85□□□□□ -0.51
VAPA-209ENST00000585042 IL36GQ9NZH8 169 aa11.85□□□□□ -0.51
VAPA-209ENST00000585042 CNOT2Q9NZN8 540 aaKnown RBP11.85□□□□□ -0.51
VAPA-209ENST00000585042 HSPB6O14558 160 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 GNAO1P09471 354 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
VAPA-209ENST00000585042 LIMS3P0CW19 117 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 LIMS4P0CW20 117 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 ST3GAL4Q11206 333 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 RIPK1Q13546 671 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 Q3ZCU0 254 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 CCDC58Q4VC31 144 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 LINC00596Q86U02 117 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 ZNF695Q8IW36 515 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 STPG2Q8N412 459 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 STX19Q8N4C7 294 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 LINC00311Q8N616 119 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 RFESDQ8TAC1 157 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 MRGPRDQ8TDS7 321 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 TNFAIP8L1Q8WVP5 186 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 NOL4LQ96MY1 436 aaPredicted RBP11.84□□□□□ -0.51
VAPA-209ENST00000585042 PLCXD1Q9NUJ7 323 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 PAK1IP1Q9NWT1 392 aaPredicted RBP11.84□□□□□ -0.51
VAPA-209ENST00000585042 SCN3BQ9NY72 215 aa11.84□□□□□ -0.51
VAPA-209ENST00000585042 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 AP4M1O00189 453 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 GABRPO00591 440 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 IGKV1D-33P01593 117 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 IGKV1-33P01594 117 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 CD2P06729 351 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 AQP4P55087 323 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 DGCR2P98153 550 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 DIAPH2-AS1Q14236 149 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 HNF4GQ14541 408 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 PNLIPRP3Q17RR3 467 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 C11orf87Q6NUJ2 197 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 RPL22L1Q6P5R6 122 aaKnown RBP11.83□□□□□ -0.52
VAPA-209ENST00000585042 C8orf86Q6ZUL3 223 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 SATL1Q86VE3 508 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 IZUMO1Q8IYV9 350 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 SUMF2Q8NBJ7 301 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 BPIFB6Q8NFQ5 453 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 OR2T10Q8NGZ9 312 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 PLPPR1Q8TBJ4 325 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 TSEN15Q8WW01 171 aaKnown RBP11.83□□□□□ -0.52
VAPA-209ENST00000585042 NRG4Q8WWG1 115 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 GGHQ92820 318 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 LEAP2Q969E1 77 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 PDCD1LG2Q9BQ51 273 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 DPCDQ9BVM2 203 aaPredicted RBP11.83□□□□□ -0.52
VAPA-209ENST00000585042 METTL9Q9H1A3 318 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 ABCG5Q9H222 651 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 LIN7CQ9NUP9 197 aaKnown RBP11.83□□□□□ -0.52
VAPA-209ENST00000585042 BABAM2Q9NXR7 383 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 ST3GAL6Q9Y274 331 aa11.83□□□□□ -0.52
VAPA-209ENST00000585042 IGHV1-3A0A0C4DH29 117 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 E9PI62 339 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 CCL24O00175 119 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 HSD17B6O14756 317 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 ORC5O43913 435 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 IGHV3-7P01780 117 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 CD1BP29016 333 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 CDX1P47902 265 aaPredicted RBP11.82□□□□□ -0.52
VAPA-209ENST00000585042 GNG10P50151 68 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 ETV1P50549 477 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 PIGYQ3MUY2 71 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 Q8N6K4 173 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 RNF152Q8N8N0 203 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 KLHL30-AS1Q8NEE0 82 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 OR8H1Q8NGG4 311 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 OR52N1Q8NH53 320 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 GPR148Q8TDV2 347 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 FBLIM1Q8WUP2 373 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 EAF1Q96JC9 268 aaPredicted RBP11.82□□□□□ -0.52
VAPA-209ENST00000585042 TMEM138Q9NPI0 162 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 PSORS1C1Q9UIG5 152 aa11.82□□□□□ -0.52
VAPA-209ENST00000585042 TMEM30CPA0ZSE6 113 aa11.81□□□□□ -0.52
VAPA-209ENST00000585042 MYL12BO14950 172 aa11.81□□□□□ -0.52
VAPA-209ENST00000585042 ZNF780AO75290 641 aaPredicted RBP11.81□□□□□ -0.52
VAPA-209ENST00000585042 HTR3BO95264 441 aa11.81□□□□□ -0.52
VAPA-209ENST00000585042 ATP6V1G2O95670 118 aa11.81□□□□□ -0.52
VAPA-209ENST00000585042 CSTBP04080 98 aaKnown RBP11.81□□□□□ -0.52
VAPA-209ENST00000585042 ELANEP08246 267 aa11.81□□□□□ -0.52
VAPA-209ENST00000585042 IL3RAP26951 378 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms