RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 OR10A7Q8NGE5 316 aa16.19■□□□□ 0.18
TOP3A-219ENST00000584887 CYGBQ8WWM9 190 aa16.19■□□□□ 0.18
TOP3A-219ENST00000584887 ARL11Q969Q4 196 aa16.19■□□□□ 0.18
TOP3A-219ENST00000584887 ZNF184Q99676 751 aaPredicted RBP16.19■□□□□ 0.18
TOP3A-219ENST00000584887 PAK1IP1Q9NWT1 392 aaPredicted RBP16.19■□□□□ 0.18
TOP3A-219ENST00000584887 IL36GQ9NZH8 169 aa16.19■□□□□ 0.18
TOP3A-219ENST00000584887 IGHV3-43A0A0B4J1X8 118 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 IRGMA1A4Y4 181 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 CCRL2O00421 344 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 IGHV3-43DP0DP04 118 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 NHLRC3Q5JS37 347 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 SLC16A12Q6ZSM3 486 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 SLC35E3Q7Z769 313 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 OR51D1Q8NGF3 324 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 CHPT1Q8WUD6 406 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 SMIM19Q96E16 107 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 IFT22Q9H7X7 185 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 CHCHD3Q9NX63 227 aaKnown RBP16.18■□□□□ 0.18
TOP3A-219ENST00000584887 BABAM2Q9NXR7 383 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 CKLFQ9UBR5 152 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 CLEC2DQ9UHP7 191 aa16.18■□□□□ 0.18
TOP3A-219ENST00000584887 EXOSC1Q9Y3B2 195 aaKnown RBP16.18■□□□□ 0.18
TOP3A-219ENST00000584887 A0A1W2PP11 408 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 MAGEA13PA6NCF6 341 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 OGG1O15527 345 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 GAPDHP04406 335 aaKnown RBP16.17■□□□□ 0.18
TOP3A-219ENST00000584887 GZMHP20718 246 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 HOXD3P31249 432 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-219ENST00000584887 RPL23AP62750 156 aaKnown RBP16.17■□□□□ 0.18
TOP3A-219ENST00000584887 MPV17LQ2QL34 196 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 LINC00596Q86U02 117 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 STX19Q8N4C7 294 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 GHSRQ92847 366 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 RDH12Q96NR8 316 aa16.17■□□□□ 0.18
TOP3A-219ENST00000584887 DIMT1Q9UNQ2 313 aaKnown RBP16.17■□□□□ 0.18
TOP3A-219ENST00000584887 IGHV1-3A0A0C4DH29 117 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 NCBP2LA6PVI3 153 aaKnown RBP16.16■□□□□ 0.18
TOP3A-219ENST00000584887 K7EIL1 84 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 AIPO00170 330 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 FGF16O43320 207 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 DUS4LO95620 317 aaKnown RBP16.16■□□□□ 0.18
TOP3A-219ENST00000584887 LALBAP00709 142 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 GTF2F2P13984 249 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 SLC35B1P78383 322 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 MED21Q13503 144 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 LRRC36Q1X8D7 754 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 FAM53AQ6NSI3 398 aaPredicted RBP16.16■□□□□ 0.18
TOP3A-219ENST00000584887 C18orf65Q6ZTR6 163 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 FOXRED2Q8IWF2 684 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 JAGN1Q8N5M9 183 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 LINC00482Q8N8I6 264 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 DPF1Q92782 380 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 MUL1Q969V5 352 aa16.16■□□□□ 0.18
TOP3A-219ENST00000584887 TRAV8-7A0A075B6U6 113 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 PNMA8CA0A1B0GUJ8 204 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 ZNF780AO75290 641 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-219ENST00000584887 IL3RAP26951 378 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 KRTAP10-11P60412 298 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 ZNF816Q0VGE8 651 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-219ENST00000584887 DEFB121Q5J5C9 76 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 ETV3LQ6ZN32 361 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 C8orf86Q6ZUL3 223 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 OR2W3Q7Z3T1 314 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 MRPL41Q8IXM3 137 aaKnown RBP16.15■□□□□ 0.18
TOP3A-219ENST00000584887 KLHL30-AS1Q8NEE0 82 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 GFOD1Q9NXC2 390 aa16.15■□□□□ 0.18
TOP3A-219ENST00000584887 MRPS28Q9Y2Q9 187 aaKnown RBP16.15■□□□□ 0.18
TOP3A-219ENST00000584887 TRBV5-5A0A0J9YX44 114 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 A0A1W2PPK0 400 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 C15orf65H3BRN8 121 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 EBAG9O00559 213 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 IGFBP3P17936 291 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-219ENST00000584887 Q499Y3 187 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 DMKNQ6E0U4 476 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-219ENST00000584887 OR52M1Q8NGK5 317 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 TMEM80Q96HE8 168 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 EAF1Q96JC9 268 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-219ENST00000584887 GNG12Q9UBI6 72 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 TRAPPC2LQ9UL33 140 aa16.14■□□□□ 0.17
TOP3A-219ENST00000584887 WI2-2373I1.2A0A1W2PRP0 233 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 IGHG2P01859 326 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 MT-ND4P03905 459 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 THBS3P49746 956 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 GPR176Q14439 515 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 YIF1BQ5BJH7 314 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 GLIPR1L1Q6UWM5 242 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 ZNF497Q6ZNH5 498 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 IZUMO1Q8IYV9 350 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 STPG2Q8N412 459 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 PRR18Q8N4B5 295 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 SETD9Q8NE22 299 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 OR10V1Q8NGI7 309 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 OR2T10Q8NGZ9 312 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 OR14A2Q96R54 314 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 GPR61Q9BZJ8 451 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 ETAA1Q9NY74 926 aa16.13■□□□□ 0.17
TOP3A-219ENST00000584887 LINC01548A6NM66 108 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 MCRIP1C9JLW8 97 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 SLC31A2O15432 143 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 SPINT2O43291 252 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms