RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 GLIPR1P48060 266 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 UCP3P55916 312 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 DHODHQ02127 395 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 HFEQ30201 348 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 CD276Q5ZPR3 534 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 ZNF626Q68DY1 528 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 ZNRF1Q8ND25 227 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 DEFB108BQ8NET1 73 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 CAPSLQ8WWF8 208 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 LURAP1Q96LR2 239 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 SEC22CQ9BRL7 303 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 RTBDNQ9BSG5 229 aaPredicted RBP11.65□□□□□ -0.54
UBBP4-202ENST00000584755 FXYD6Q9H0Q3 95 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 DLL4Q9NR61 685 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 OPN4Q9UHM6 478 aa11.65□□□□□ -0.54
UBBP4-202ENST00000584755 MEIKINA0A087WXM9 373 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 ZBTB25P24278 435 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 COL8A2P25067 703 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 P2RX3P56373 397 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 TAS2R31P59538 309 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 SEC61A1P61619 476 aaKnown RBP11.64□□□□□ -0.55
UBBP4-202ENST00000584755 IL13RA1P78552 427 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 TLE4Q04727 773 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 CBX3Q13185 183 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 C6orf183Q5T699 404 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 TRAT1Q6PIZ9 186 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 TMED4Q7Z7H5 227 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 AKAP14Q86UN6 197 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 KIRREL1Q96J84 757 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 CCL13Q99616 98 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 TAF9BQ9HBM6 251 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 ING3Q9NXR8 418 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
UBBP4-202ENST00000584755 TRAV39A0A0B4J263 110 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 A0A1B0GW55 424 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 ODAMA1E959 279 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 NKX6-3A6NJ46 265 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 C12orf77C9JDV5 145 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 NDUFA2O43678 99 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 CREBL2O60519 120 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-202ENST00000584755 PPYP01298 95 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 CTSDP07339 412 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DUX4L2P0CJ85 424 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DUX4L3P0CJ86 424 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DUX4L4P0CJ87 422 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DUX4L5P0CJ88 424 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DUX4L6P0CJ89 424 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DUX4L7P0CJ90 424 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 SELLP14151 372 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 AADACP22760 399 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 NFYAP23511 347 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-202ENST00000584755 KCNJ8Q15842 424 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DUX4L9Q6RFH8 374 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-202ENST00000584755 H1FOOQ8IZA3 346 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-202ENST00000584755 ADAD2Q8NCV1 583 aaKnown RBP11.63□□□□□ -0.55
UBBP4-202ENST00000584755 OR52B4Q8NGK2 314 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 OR13A1Q8NGR1 328 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 ZFAND1Q8TCF1 268 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 ZNF431Q8TF32 576 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-202ENST00000584755 IGFBPL1Q8WX77 278 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 TMEM230Q96A57 120 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 ST6GAL2Q96JF0 529 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 TMPRSS13Q9BYE2 586 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 TOLLIPQ9H0E2 274 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 MED28Q9H204 178 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 UBTD1Q9HAC8 227 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 KCNIP1Q9NZI2 227 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DUX4Q9UBX2 424 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 LAMP3Q9UQV4 416 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 C15orf65H3BRN8 121 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 BET1O15155 118 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 HEXAP06865 529 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 ZNF728P0DKX0 622 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 SULT1A3P0DMM9 295 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 SULT1A4P0DMN0 295 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 CGB3P0DN86 165 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 CGB7P0DN87 165 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 CD300CQ08708 224 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 DHRS2Q13268 280 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 FCN2Q15485 313 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 C4orf46Q504U0 113 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 TMEM128Q5BJH2 165 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 LYG2Q86SG7 212 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 MUC20Q8N307 709 aaPredicted RBP11.63□□□□□ -0.55
UBBP4-202ENST00000584755 FAM216BQ8N7L0 139 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 TPRX1Q8N7U7 411 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 TMEM246Q9BRR3 403 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 SLC23A1Q9UHI7 598 aa11.63□□□□□ -0.55
UBBP4-202ENST00000584755 C9orf170A2RU37 121 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 OVOL3O00110 214 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 CCNKO75909 580 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 IGHV2-70P01814 119 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 HBZP02008 142 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 PGAM2P15259 253 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 RPS2P15880 293 aaKnown RBP11.62□□□□□ -0.55
UBBP4-202ENST00000584755 GZMHP20718 246 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 HERV-K104P61576 105 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 BAMBIQ13145 260 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 PPP1R1AQ13522 171 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 EDDM3AQ14507 147 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms