RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 PLPPR1Q8TBJ4 325 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 SMIM4Q8WVI0 70 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 CAPSLQ8WWF8 208 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FCAMRQ8WWV6 532 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 POM121Q96HA1 1249 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 CMSS1Q9BQ75 279 aaKnown RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 ST6GALNAC5Q9BVH7 336 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 SHARPINQ9H0F6 387 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 SPACA1Q9HBV2 294 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 IFT46Q9NQC8 304 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 VPS13CQ709C8 3753 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 A0A0A6YYH2 397 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 A6NJ64 397 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 GABARAPH6UMI1 98 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FOXH1O75593 365 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FCN3O75636 299 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 GSTP1P09211 210 aaKnown RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 S100A1P23297 94 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 ZFP36P26651 326 aaKnown RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 ERP29P30040 261 aaKnown RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 BTCP35070 178 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 OR3A1P47881 315 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 NPY4RP50391 375 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 EDDM3BP56851 147 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 MRPS15P82914 257 aaKnown RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 DYRK1AQ13627 763 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 TMEM249Q2WGJ8 235 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 BTN2A1Q7KYR7 527 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 OR5D13Q8NGL4 314 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 DPAGT1Q9H3H5 408 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 SLA2Q9H6Q3 261 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 IFT22Q9H7X7 185 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 RANGRFQ9HD47 186 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 NUBP2Q9Y5Y2 271 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 LOC105371242A0A075B767 164 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 B4DSR2 109 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 MGST3O14880 152 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 GPR37O15354 613 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 DHFRP00374 187 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 C1QBP02746 253 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 MT-ND4P03905 459 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 LPLP06858 475 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 GZMKP49863 264 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 MRPS10P82664 201 aaKnown RBP9.07□□□□□ -0.96
TOP3A-216ENST00000583804 AESQ08117 197 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 RBM39Q14498 530 aaKnown RBP9.07□□□□□ -0.96
TOP3A-216ENST00000583804 CD276Q5ZPR3 534 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 SPNS3Q6ZMD2 512 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 Q6ZPA2 131 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 GLCCI1Q86VQ1 547 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 LINC01356Q8N9X3 169 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 GPX8Q8TED1 209 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 C15orf40Q8WUR7 153 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 DCTN5Q9BTE1 182 aa9.07□□□□□ -0.96
TOP3A-216ENST00000583804 RCC2Q9P258 522 aaKnown RBP9.07□□□□□ -0.96
TOP3A-216ENST00000583804 ITPR3Q14573 2671 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 IGKV1D-8A0A087WSZ0 117 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 KIAA1324LA8MWY0 1029 aaPredicted RBP9.06□□□□□ -0.96
TOP3A-216ENST00000583804 M0QYG6 137 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 RBBP9O75884 186 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 ECDO95905 644 aaPredicted RBP9.06□□□□□ -0.96
TOP3A-216ENST00000583804 TGFAP01135 160 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 PMP2P02689 132 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 IGHV4-31P0DP07 118 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 KRBOX4Q5JUW0 171 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 CYB5R2Q6BCY4 276 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 FAM185AQ8N0U4 392 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 TOMM5Q8N4H5 51 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 MSI2Q96DH6 328 aaKnown RBP9.06□□□□□ -0.96
TOP3A-216ENST00000583804 C18orf12Q96KH6 178 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 FYTTD1Q96QD9 318 aaKnown RBP9.06□□□□□ -0.96
TOP3A-216ENST00000583804 KIF25Q9UIL4 384 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 HSF4Q9ULV5 492 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 CREBBPQ92793 2442 aa9.06□□□□□ -0.96
TOP3A-216ENST00000583804 NAP1L6A6NFF2 107 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 SERPINE3A8MV23 424 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 A8MV72 311 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-216ENST00000583804 C22orf46C9J442 243 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 GLAP06280 429 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 MSMBP08118 114 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 FCGR3AP08637 254 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 CD99P14209 185 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 GLIPR1P48060 266 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 KCNJ3P48549 501 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 P2RX3P56373 397 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 RPL31P62899 125 aaKnown RBP9.05□□□□□ -0.96
TOP3A-216ENST00000583804 KLF9Q13886 244 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-216ENST00000583804 LTC4SQ16873 150 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 PNLIPRP3Q17RR3 467 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 PRR18Q8N4B5 295 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 OR4D10Q8NGI6 311 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 MRPL30Q8TCC3 161 aaKnown RBP9.05□□□□□ -0.96
TOP3A-216ENST00000583804 ZFAND1Q8TCF1 268 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 DEDD2Q8WXF8 326 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 COQ2Q96H96 371 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 C1orf159Q96HA4 380 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 DMRTB1Q96MA1 342 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 NUDT16L1Q9BRJ7 211 aaKnown RBP9.05□□□□□ -0.96
TOP3A-216ENST00000583804 GON7Q9BXV9 100 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 GHITMQ9H3K2 345 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms