RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 PTGES3Q15185 160 aaKnown RBP9.82□□□□□ -0.84
SS18-219ENST00000581570 HAGHQ16775 308 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 RSBN1Q5VWQ0 802 aaPredicted RBP9.82□□□□□ -0.84
SS18-219ENST00000581570 LINC00311Q8N616 119 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 TCEANCQ8N8B7 351 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 PLPPR1Q8TBJ4 325 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 LRGUKQ96M69 825 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 PRRG3Q9BZD7 231 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 ZCCHC4Q9H5U6 513 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 FAM118AQ9NWS6 357 aa9.82□□□□□ -0.84
SS18-219ENST00000581570 ALMS1Q8TCU4 4167 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 RBMY1BA6NDE4 496 aaKnown RBP9.81□□□□□ -0.84
SS18-219ENST00000581570 FAM90A10PA6NDY2 464 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 RBMY1EA6NEQ0 496 aaKnown RBP9.81□□□□□ -0.84
SS18-219ENST00000581570 J3QL48 77 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 M0R129 80 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 HSPA12AO43301 675 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 APOL3O95236 402 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 MT-ND2P03891 347 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 RBMY1DP0C7P1 496 aaKnown RBP9.81□□□□□ -0.84
SS18-219ENST00000581570 OR2T7P0C7T2 308 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 TMEM225BP0DP42 221 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 DBTP11182 482 aaKnown RBP9.81□□□□□ -0.84
SS18-219ENST00000581570 ARSBP15848 533 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 MTNR1BP49286 362 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 HAPLN4Q86UW8 402 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 ADGRG5Q8IZF4 528 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 OR13C9Q8NGT0 318 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 CNIH3Q8TBE1 160 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 TMEM163Q8TC26 289 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 TOLLIPQ9H0E2 274 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 TPSG1Q9NRR2 321 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 MYRFQ9Y2G1 1151 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 HERC2O95714 4834 aa9.81□□□□□ -0.84
SS18-219ENST00000581570 IGHV4OR15-8A0A075B7B6 117 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 A0A087WW49 117 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 TRAV41A0A0B4J266 112 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 SDCBPO00560 298 aaPredicted RBP9.8□□□□□ -0.84
SS18-219ENST00000581570 ATP6V0E1O15342 81 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 GZMHP20718 246 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 KCNJ3P48549 501 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 EFNB1P98172 346 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 PAX5Q02548 391 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 GID4Q8IVV7 300 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 ARHGAP24Q8N264 748 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 C8orf31Q8N9H6 132 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 OR10H4Q8NGA5 316 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 OR52M1Q8NGK5 317 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 ARL11Q969Q4 196 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 UTP4Q969X6 686 aaKnown RBP9.8□□□□□ -0.84
SS18-219ENST00000581570 IL4I1Q96RQ9 567 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 MBOAT4Q96T53 435 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 ELOVL1Q9BW60 279 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 FAM107BQ9H098 131 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 PARP11Q9NR21 331 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 WARS2Q9UGM6 360 aaKnown RBP9.8□□□□□ -0.84
SS18-219ENST00000581570 GNG8Q9UK08 70 aa9.8□□□□□ -0.84
SS18-219ENST00000581570 MRPS28Q9Y2Q9 187 aaKnown RBP9.8□□□□□ -0.84
SS18-219ENST00000581570 TXNL1O43396 289 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 SNX3O60493 162 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 FAM107AO95990 144 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 LGALS1P09382 135 aaKnown RBP9.79□□□□□ -0.84
SS18-219ENST00000581570 IL13RA2Q14627 380 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 MMDQ15546 238 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 TP53I3Q53FA7 332 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 ELP2Q6IA86 826 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 FAM220AQ7Z4H9 259 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 ANKRD13BQ86YJ7 626 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 MINDY2Q8NBR6 621 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 OR2G2Q8NGZ5 317 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 UBALD1Q8TB05 177 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 CANT1Q8WVQ1 401 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 DNAJC9Q8WXX5 260 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 FLYWCH2Q96CP2 140 aaKnown RBP9.79□□□□□ -0.84
SS18-219ENST00000581570 TUBA4BQ9H853 241 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 GFOD1Q9NXC2 390 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 STUB1Q9UNE7 303 aa9.79□□□□□ -0.84
SS18-219ENST00000581570 IGHV3-43A0A0B4J1X8 118 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 B2RBV5 119 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 C15orf65H3BRN8 121 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 SLC31A2O15432 143 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 SLC25A17O43808 307 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 IGLV1-51P01701 117 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
SS18-219ENST00000581570 ISG15P05161 165 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 IGHV3-43DP0DP04 118 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 ATP6V1E1P36543 226 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 VHLP40337 213 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 KISS1Q15726 138 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 SLC25A48Q6ZT89 311 aaKnown RBP9.78□□□□□ -0.84
SS18-219ENST00000581570 OR13C3Q8NGS6 347 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 OR10AC1Q8NH08 325 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 RSRP1Q9BUV0 290 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 FRRS1LQ9P0K9 344 aa9.78□□□□□ -0.84
SS18-219ENST00000581570 IGHV7-81A0A0B4J1V7 117 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 A0A1W2PN81 502 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 C12orf77C9JDV5 145 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 HLA-DRB1P01911 266 aa9.77□□□□□ -0.85
SS18-219ENST00000581570 BLVRBP30043 206 aaPredicted RBP9.77□□□□□ -0.85
SS18-219ENST00000581570 CHRNA7P36544 502 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms