RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 RAB40BQ12829 278 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 KIR2DS1Q14954 304 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 LTC4SQ16873 150 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 ZIK1Q3SY52 487 aaPredicted RBP8.33□□□□□ -1.08
RFFL-209ENST00000581265 NHLRC3Q5JS37 347 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 MOB3BQ86TA1 216 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 SATL1Q86VE3 508 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 IZUMO1Q8IYV9 350 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 LINC00311Q8N616 119 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 RNF152Q8N8N0 203 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 OR10K1Q8NGX5 313 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 OR2T10Q8NGZ9 312 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 TSEN15Q8WW01 171 aaKnown RBP8.33□□□□□ -1.08
RFFL-209ENST00000581265 PYDC1Q8WXC3 89 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 ST6GALNAC6Q969X2 333 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 Q96MT0 163 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 DCLRE1BQ9H816 532 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 AMBNQ9NP70 447 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 PLSCR3Q9NRY6 295 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 LIN7CQ9NUP9 197 aaKnown RBP8.33□□□□□ -1.08
RFFL-209ENST00000581265 MRPS18AQ9NVS2 196 aaKnown RBP8.33□□□□□ -1.08
RFFL-209ENST00000581265 FAM118AQ9NWS6 357 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 IL36GQ9NZH8 169 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 ST3GAL6Q9Y274 331 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 LSM4Q9Y4Z0 139 aaKnown RBP8.33□□□□□ -1.08
RFFL-209ENST00000581265 NCBP2LA6PVI3 153 aaKnown RBP8.32□□□□□ -1.08
RFFL-209ENST00000581265 ORC5O43913 435 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 CIB2O75838 187 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 CDRT1O95170 752 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 HTR3BO95264 441 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 RPLP1P05386 114 aaKnown RBP8.32□□□□□ -1.08
RFFL-209ENST00000581265 ELANEP08246 267 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 CD1BP29016 333 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 REG1BP48304 166 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 FOXE3Q13461 319 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 Q3ZCU0 254 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 LPCAT4Q643R3 524 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 Q8N9W7 124 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 TMEM104Q8NE00 496 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 OR8H1Q8NGG4 311 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 OR52N1Q8NH53 320 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 GPR148Q8TDV2 347 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 RGP1Q92546 391 aaPredicted RBP8.32□□□□□ -1.08
RFFL-209ENST00000581265 TFAP2CQ92754 450 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 ARL11Q969Q4 196 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 JAM3Q9BX67 310 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 PALMDQ9NP74 551 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 TMEM138Q9NPI0 162 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 ZNF581Q9P0T4 197 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 GMPPBQ9Y5P6 360 aa8.32□□□□□ -1.08
RFFL-209ENST00000581265 IGHV3-72A0A0B4J1Y9 119 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 TMEM30CPA0ZSE6 113 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 H3BNX3 289 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 GEMIN2O14893 280 aaKnown RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 OR7C1O76099 320 aaPredicted RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 MOSP00540 346 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 MT-ND4P03905 459 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 CD2P06729 351 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 LIMS3P0CW19 117 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 LIMS4P0CW20 117 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 SOX2P48431 317 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 GTF2A1P52655 376 aaPredicted RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 RBM11P57052 281 aaKnown RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 GPR50Q13585 617 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 CCDC58Q4VC31 144 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 CXorf66Q5JRM2 361 aaPredicted RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 RPL22L1Q6P5R6 122 aaKnown RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 LINC00596Q86U02 117 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 CBR4Q8N4T8 237 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 OR52I1Q8NGK6 324 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 OR8U1Q8NH10 309 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 RTN4IP1Q8WWV3 396 aaPredicted RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 DUX3Q96PT4 197 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 FAM192AQ9GZU8 254 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 METTL9Q9H1A3 318 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 PAK1IP1Q9NWT1 392 aaPredicted RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 GFOD1Q9NXC2 390 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 TAS2R4Q9NYW5 299 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 ING4Q9UNL4 249 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 RPL36Q9Y3U8 105 aaKnown RBP8.31□□□□□ -1.08
RFFL-209ENST00000581265 STAB2Q8WWQ8 2551 aa8.31□□□□□ -1.08
RFFL-209ENST00000581265 SDCBPO00560 298 aaPredicted RBP8.3□□□□□ -1.08
RFFL-209ENST00000581265 DYNC1I1O14576 645 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 RRP9O43818 475 aaKnown RBP8.3□□□□□ -1.08
RFFL-209ENST00000581265 ZNF780AO75290 641 aaPredicted RBP8.3□□□□□ -1.08
RFFL-209ENST00000581265 IGHG4P01861 327 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 CSTBP04080 98 aaKnown RBP8.3□□□□□ -1.08
RFFL-209ENST00000581265 IL3RAP26951 378 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 ZNF93P35789 620 aaPredicted RBP8.3□□□□□ -1.08
RFFL-209ENST00000581265 VHLP40337 213 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 ZNF137PP52743 207 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 CFHR3Q02985 330 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 MPV17LQ2QL34 196 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 CASC10Q5T4H9 136 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 C9orf66Q5T8R8 295 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 STEAP3Q658P3 488 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 ZFP1Q6P2D0 407 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 ZNF497Q6ZNH5 498 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 LCNL1Q6ZST4 164 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 FAM71E2Q8N5Q1 922 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms