RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 BRS3P32247 399 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 PSG6Q00889 435 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 SRSF9Q13242 221 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■■□□□ 12.6
CSNK1D-217ENST00000581241 CA2P00918 260 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 EIF3IQ13347 325 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 ZNF273Q14593 569 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 DCAF12L2Q5VW00 463 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 TDHQ8IZJ6 230 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 CCL17Q92583 94 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 PPP1R3EQ9H7J1 279 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 PPIHO43447 177 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 COA4Q9NYJ1 87 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 TMEM210A6NLX4 147 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 C16orf47Q6ZP98 133 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 OR1K1Q8NGR3 316 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 RASL11BQ9BPW5 248 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 CHST5Q9GZS9 411 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 TRAV38-1A0A0B4J264 116 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 SHISA7A6NL88 538 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 M0R296 226 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 TP53RKQ96S44 253 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 RNF122Q9H9V4 155 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 MRPS18BQ9Y676 258 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 PRSS12P56730 875 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 FAM209BQ5JX69 171 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 C10orf111Q8N326 155 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 STXBP6Q8NFX7 210 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 OR5AC2Q9NZP5 309 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 OR4A8P0C604 315 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 CTGFP29279 349 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 RBPMS2Q6ZRY4 209 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 Q6ZS52 159 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 LDLRAD3Q86YD5 345 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 CYB561D1Q8N8Q1 229 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 MGPP08493 103 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 KIR3DL2P43630 455 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 TMEM108Q6UXF1 575 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 GAPDHP04406 335 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 ZNF385CQ66K41 422 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 WDR31Q8NA23 367 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 ZNF738Q8NE65 137 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 OR1P1Q8NH06 330 aa12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 RALYQ9UKM9 306 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-217ENST00000581241 LGALS7P47929 136 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 PLPPR5Q32ZL2 321 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 PTP4A3O75365 173 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 CELA2BP08218 269 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 GHITMQ9H3K2 345 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 KLHDC2Q9Y2U9 406 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 NMBP08949 121 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 ASCL5Q7RTU5 278 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 LRRC75AQ8NAA5 344 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 ZNF519Q8TB69 540 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 OR51B2Q9Y5P1 312 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 LAMB2P55268 1798 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 HSPB1P04792 205 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 CLN8Q9UBY8 286 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 K7ERU9 68 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 FSTP19883 344 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 DLX1P56177 255 aa12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 SNRNP40Q96DI7 357 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-217ENST00000581241 GNG7O60262 68 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 SERF2P84101 59 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 GABRA6Q16445 453 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 ZNF660Q6AZW8 331 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 SSX8Q7RTT4 187 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 SFTPA2Q8IWL1 248 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 SFTPA1Q8IWL2 248 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 OR51M1Q9H341 326 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 GPR35Q9HC97 309 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 J3QT63 122 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 CRXO43186 299 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 FCGR3AP08637 254 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 GZMHP20718 246 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 MPLP40238 635 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 ZNF137PP52743 207 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 HBZP02008 142 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 RNF224P0DH78 156 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 HKR1P10072 659 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 COL9A1P20849 921 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 OR5A2Q8NGI9 324 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 SIRT4Q9Y6E7 314 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
CSNK1D-217ENST00000581241 K7EQS6 105 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 KLF7O75840 302 aaPredicted RBP12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 ZNF205O95201 554 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 TRGC2P03986 189 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 OR5R1Q8NH85 324 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 Q8WTZ3 238 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 OR2V2Q96R30 315 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 GPA33Q99795 319 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 HSPB9Q9BQS6 159 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 HDHD3Q9BSH5 251 aaPredicted RBP12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 PIPOXQ9P0Z9 390 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms