RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 DCUN1D4Q92564 292 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 NINJ1Q92982 152 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TOMM40LQ969M1 308 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 RTBDNQ9BSG5 229 aaPredicted RBP10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF442Q9H7R0 627 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 METTL8Q9H825 291 aaKnown RBP10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CHMP1AQ9HD42 196 aaPredicted RBP10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GSKIPQ9P0R6 139 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SHPKQ9UHJ6 478 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 C14orf166Q9Y224 244 aaKnown RBP10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MYO18BQ8IUG5 2567 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CST4P01036 141 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 HOXB5P09067 269 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PVALBP20472 110 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 S100A12P80511 92 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CEACAM21Q3KPI0 293 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PAN3Q58A45 887 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SVBPQ8N300 66 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CA5BP1Q8WTZ4 195 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SLAMF9Q96A28 289 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PHYHIPLQ96FC7 376 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR10C1Q96KK4 312 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SYT3Q9BQG1 590 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR5AC2Q9NZP5 309 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ANXA10Q9UJ72 324 aa10.77□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PQLC2LA1A4F0 135 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RAB19A4D1S5 217 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SYNGR1O43759 233 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZG16O60844 167 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR5H8P0DN80 308 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SLC25A4P12235 298 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CHATP28329 748 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CHRNB4P30926 498 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 Q6ZR03 302 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 C5orf24Q7Z6I8 188 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 WDR86Q86TI4 376 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 Q8NFD4 153 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR5P3Q8WZ94 311 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RNF126Q9BV68 326 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 IL36RNQ9UBH0 155 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RHBDL1O75783 438 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SFT2D2O95562 160 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MEOX2P50222 304 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 FXYD4P59646 89 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 BSPH1Q075Z2 132 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SRSF4Q08170 494 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ADAM5Q6NVV9 412 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ACOT7LQ6ZUV0 252 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 LHFPL1Q86WI0 220 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 HIST1H2AAQ96QV6 131 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR2S2Q9NQN1 319 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 BIN3Q9NQY0 253 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 DCHS2Q6V1P9 2916 aa10.76□□□□□ -0.69
CDK5RAP3-217ENST00000580287 UTP20O75691 2785 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PRSS44E7EML9 344 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 HSPB6O14558 160 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TIMM8AO60220 97 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 FCGR3AP08637 254 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SRSF3P84103 164 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SLC22A25Q6T423 547 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 LURAP1LQ8IV03 231 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 INO80EQ8NBZ0 244 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TMED6Q8WW62 240 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TECTBQ96PL2 329 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TEX13DA0A0J9YY54 714 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MLNRO43193 412 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 GRPP07492 148 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 BCL3P20749 454 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PSMB6P28072 239 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 DUSP1P28562 367 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 DHRS7BQ6IAN0 325 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CLEC9AQ6UXN8 241 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 NEUROG1Q92886 237 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 BCL2L14Q9BZR8 327 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 LIME1Q9H400 295 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ERRFI1Q9UJM3 462 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 HSF4Q9ULV5 492 aa10.75□□□□□ -0.69
CDK5RAP3-217ENST00000580287 DBX1A6NMT0 343 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 GCH1P30793 250 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RBM11P57052 281 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZNF718Q3SXZ3 478 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SPRNQ5BIV9 151 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PEG10Q86TG7 708 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 NEK7Q8TDX7 302 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TMEM171Q8WVE6 324 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 NECAP2Q9NVZ3 263 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MTCH1Q9NZJ7 389 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CHD6Q8TD26 2715 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PDCD6O75340 191 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CA11O75493 328 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 F12P00748 615 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 HLA-GP17693 338 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ASCL1P50553 236 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 S100A10P60903 97 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 NKX6-1P78426 367 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ASCL4Q6XD76 172 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZNF826PQ6ZT77 177 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CLUHP3Q96NS8 147 aa10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OPA3Q9H6K4 179 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms