RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 LIPAP38571 399 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 CEACAM3P40198 252 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 MDH2P40926 338 aaKnown RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PMELP40967 661 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 APOBEC1P41238 236 aaKnown RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 CDX1P47902 265 aaPredicted RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 GIPRP48546 466 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SELENOPP49908 381 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 RAB7AP51149 207 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 NCBP2P52298 156 aaKnown RBP eCLIP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 BIDP55957 195 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PIGPP57054 158 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR2B8PP59922 312 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 ERVS71-1P61550 626 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 BTG1P62324 171 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 RAB1AP62820 205 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 HERV-K104P63124 156 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SLC35A1P78382 337 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 FAM3AP98173 230 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PPP1R8Q12972 351 aaKnown RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PLA2G7Q13093 441 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR5I1Q13606 314 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 KIAA0141Q14154 515 aaPredicted RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 KIAA0040Q15053 153 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PRSS53Q2L4Q9 553 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 ARHGAP11BQ3KRB8 267 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 FAM74A3Q4VXF1 159 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SPRNQ5BIV9 151 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 TMEM41BQ5BJD5 291 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 Q5BKY6 102 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 TMEM225Q6GV28 225 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR2T5Q6IEZ7 315 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PRR27Q6MZM9 219 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 REEP3Q6NUK4 255 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 FAHD1Q6P587 224 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 TMEM107Q6UX40 140 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 TMPRSS11AQ6ZMR5 421 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 RPS27LQ71UM5 84 aaKnown RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 ZNF367Q7RTV3 350 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 DPY19L4Q7Z388 723 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 COMMD6Q7Z4G1 85 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 C6orf120Q7Z4R8 191 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 NRARPQ7Z6K4 114 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 TMEM179BQ7Z7N9 219 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 LYG2Q86SG7 212 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SYT9Q86SS6 491 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 CALHM3Q86XJ0 350 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PTOV1Q86YD1 416 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 CALHM1Q8IU99 346 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SNX29P2Q8IUI4 249 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 LINC00346Q8IVM7 164 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 BOD1L2Q8IYS8 172 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 C1orf87Q8N0U7 546 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 MS4A15Q8N5U1 240 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 CLDN22Q8N7P3 220 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 TMEM99Q8N816 258 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 CYB561A3Q8NBI2 242 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SCCPDHQ8NBX0 429 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 DUSP18Q8NEJ0 188 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PROKR2Q8NFJ6 384 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 BEST4Q8NFU0 473 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR11H1Q8NG94 326 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR4M1Q8NGD0 313 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR56A1Q8NGH5 318 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR8D4Q8NGM9 314 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR4C13Q8NGP0 309 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR10K1Q8NGX5 313 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR2G2Q8NGZ5 317 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR2T29Q8NH02 315 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR11H2Q8NH07 326 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 KCNG3Q8TAE7 436 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 C8orf46Q8TAG6 207 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 ZNF519Q8TB69 540 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 CNIH3Q8TBE1 160 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SLC25A43Q8WUT9 341 aaPredicted RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 ST8SIA1Q92185 356 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 GGHQ92820 318 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 LHX4Q969G2 390 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 RPUSD4Q96CM3 377 aaKnown RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 REEP6Q96HR9 211 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PGAM5Q96HS1 289 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 RAX2Q96IS3 184 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 ITCHQ96J02 903 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 HRASLS5Q96KN8 279 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 TMEM56Q96MV1 263 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 ZNF75AQ96N20 296 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 AMDHD1Q96NU7 426 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 FYTTD1Q96QD9 318 aaKnown RBP1.98□□□□□ -2.09
SNORD53-201ENST00000579969 OR5B12Q96R08 314 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 ATOH8Q96SQ7 321 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 PITX2Q99697 317 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SULT4A1Q9BR01 284 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 NICN1Q9BSH3 213 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SPATA5L1Q9BVQ7 753 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 CDCA4Q9BXL8 241 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 GABARAPL3Q9BY60 117 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 DPY30Q9C005 99 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 MEGF9Q9H1U4 602 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 SLC25A32Q9H2D1 315 aa1.98□□□□□ -2.09
SNORD53-201ENST00000579969 HRH4Q9H3N8 390 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms