RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 NHLRC3Q5JS37 347 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 TMPRSS11AQ6ZMR5 421 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ZNF485Q8NCK3 441 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 OR52N1Q8NH53 320 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 RFESDQ8TAC1 157 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 TMEM106AQ96A25 262 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 DPCDQ9BVM2 203 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 IFT22Q9H7X7 185 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 CHCHD3Q9NX63 227 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 IL36GQ9NZH8 169 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 TPRKBQ9Y3C4 175 aa13.2□□□□□ -0.3
CDK5RAP3-206ENST00000578018 TRAV39A0A0B4J263 110 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 PSMB11A5LHX3 300 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 CDRT1O95170 752 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 HTR3BO95264 441 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 CDK1P06493 297 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 RBM11P57052 281 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 RBM48Q5RL73 367 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 RPL22L1Q6P5R6 122 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 AHSA2Q719I0 299 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 OR8H3Q8N146 312 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 STX19Q8N4C7 294 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 C5orf56Q8N8D9 126 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 SUMF2Q8NBJ7 301 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 OR10A7Q8NGE5 316 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 RCC1LQ96I51 464 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 CLEC2DQ9UHP7 191 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ST3GAL6Q9Y274 331 aa13.19□□□□□ -0.3
CDK5RAP3-206ENST00000578018 OR7C1O76099 320 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 TMEM11P17152 192 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 CRHBPP24387 322 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 RAB7AP51149 207 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 PPP3R1P63098 170 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 HES1Q14469 280 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 DDI2Q5TDH0 399 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 OR2G6Q5TZ20 316 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 SLC16A12Q6ZSM3 486 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 TMEM138Q9NPI0 162 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 BABAM2Q9NXR7 383 aa13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 SIRT4Q9Y6E7 314 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-206ENST00000578018 PTGES3LE9PB15 166 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 HSD17B6O14756 317 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 GEMIN2O14893 280 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 FGF16O43320 207 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 MPIG6BO95866 241 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ZNF93P35789 620 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ETV3LQ6ZN32 361 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 NANOGP1Q8N7R0 232 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 LINC00482Q8N8I6 264 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 OR10X1Q8NGY0 326 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ORAI1Q96D31 301 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 SMIM19Q96E16 107 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 YTHDF1Q9BYJ9 559 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 METTL9Q9H1A3 318 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 PAK1IP1Q9NWT1 392 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ING4Q9UNL4 249 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ZNF281Q9Y2X9 895 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 COL7A1Q02388 2944 aa13.17□□□□□ -0.3
CDK5RAP3-206ENST00000578018 A0A1W2PPE3 182 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 TMEM30CPA0ZSE6 113 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 K7EIL1 84 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 OGG1O15527 345 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 DUS4LO95620 317 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 LALBAP00709 142 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 IGKV1D-33P01593 117 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 IGKV1-33P01594 117 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 CSTBP04080 98 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 SERPINA2P20848 420 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 BDKRB2P30411 391 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 IRF3Q14653 427 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ZNF329Q86UD4 541 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 OR13C5Q8NGS8 318 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 CHPT1Q8WUD6 406 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 NOL4LQ96MY1 436 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
CDK5RAP3-206ENST00000578018 MAGEA13PA6NCF6 341 aa13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 C15orf65H3BRN8 121 aa13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 MRPS14O60783 128 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 IGFBP3P17936 291 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 KRTAP10-11P60412 298 aa13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 RPL23AP62750 156 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 ZNF816Q0VGE8 651 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 HNF4GQ14541 408 aa13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 MPV17LQ2QL34 196 aa13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 LRRC42Q9Y546 428 aa13.15□□□□□ -0.3
CDK5RAP3-206ENST00000578018 IGHV1-3A0A0C4DH29 117 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 TRBV5-5A0A0J9YX44 114 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 A0A1W2PP11 408 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SERPINE3A8MV23 424 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 MYL12BO14950 172 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 RGS10O43665 173 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 IGHG2P01859 326 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 CD1AP06126 327 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GZMHP20718 246 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 REG1BP48304 166 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms