RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 FAM30AQ9NZY2 134 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 RCL1Q9Y2P8 373 aaKnown RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 AMDHD2Q9Y303 409 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 VPS13AQ96RL7 3174 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 hCG_38984A0A1B0GV85 526 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 FAM24AA6NFZ4 105 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 ZNF732B4DXR9 585 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 HS3ST1O14792 307 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 DNPH1O43598 174 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 CA11O75493 328 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 BCL3P20749 454 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 F2RL1P55085 397 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 RBM11P57052 281 aaKnown RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 FLI1Q01543 452 aaPredicted RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 PLP2Q04941 152 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 PRDX4Q13162 271 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 TMEM187Q14656 261 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 TSC22D1Q15714 1073 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 STK11Q15831 433 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 MKXQ8IYA7 352 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 TMEM217Q8N7C4 229 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 TMEM105Q8N8V8 129 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 CPEB3Q8NE35 698 aaKnown RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 UBALD1Q8TB05 177 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 IL1F10Q8WWZ1 152 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 KIRREL1Q96J84 757 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 SUCNR1Q9BXA5 334 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 RGCCQ9H4X1 137 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 TMEM100Q9NV29 134 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 B4GALT7Q9UBV7 327 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 FBXO7Q9Y3I1 522 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 CHTOPQ9Y3Y2 248 aaKnown RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 COL5A1P20908 1838 aaPredicted RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 EXPH5Q8NEV8 1989 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 NKX2-6A6NCS4 301 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 TRAPPC2LH3BP13 241 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 RRP8O43159 456 aaKnown RBP4.59□□□□□ -1.68
VAPA-203ENST00000577539 SLC25A17O43808 307 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 PPYP01298 95 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 SULT1A2P50226 295 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 POLR2GP62487 172 aaKnown RBP eCLIP4.59□□□□□ -1.68
VAPA-203ENST00000577539 ETV3LQ6ZN32 361 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 TMEM182Q6ZP80 229 aaPredicted RBP4.59□□□□□ -1.68
VAPA-203ENST00000577539 DPPA2Q7Z7J5 298 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 WDR5BQ86VZ2 330 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 SLC35G3Q8N808 338 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 C14orf79Q96F83 325 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 ZNF488Q96MN9 340 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 SEC11CQ9BY50 192 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 ZFP57Q9NU63 452 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 ABI3Q9P2A4 366 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 IL36RNQ9UBH0 155 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 SLC25A10Q9UBX3 287 aaPredicted RBP4.59□□□□□ -1.68
VAPA-203ENST00000577539 NDRG3Q9UGV2 375 aa4.59□□□□□ -1.68
VAPA-203ENST00000577539 ESPL1Q14674 2120 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 MSTNO14793 375 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 CST7O76096 145 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 NGFP01138 241 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 GLAP06280 429 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 SCTP09683 121 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 MAGEA5P43359 124 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 NKX2-1P43699 371 aaPredicted RBP4.58□□□□□ -1.68
VAPA-203ENST00000577539 IL15RAQ13261 267 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 EIF3IQ13347 325 aaKnown RBP4.58□□□□□ -1.68
VAPA-203ENST00000577539 SPATA46Q5T0L3 261 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 GLYATL2Q8WU03 294 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 TP53RKQ96S44 253 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 ARRDC1-AS1Q9H2J1 176 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 SPACA1Q9HBV2 294 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 SH2D2AQ9NP31 389 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 RCC2Q9P258 522 aaKnown RBP4.58□□□□□ -1.68
VAPA-203ENST00000577539 STARD10Q9Y365 291 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 PRELID3BQ9Y3B1 194 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 TRAV39A0A0B4J263 110 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 C3orf85A0A1B0GTC6 90 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 SSSCA1O60232 199 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 FTH1P19P0C7X4 201 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 OR13C7P0DN81 318 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 LYL1P12980 280 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 DAOP14920 347 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 ZNF44P15621 663 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 PTAFRP25105 342 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 IGFBP7Q16270 282 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 DHRS11Q6UWP2 260 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 C1orf210Q8IVY1 113 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 OR51H1Q8NH63 302 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 CORO2AQ92828 525 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 APH1AQ96BI3 265 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 SMIM8Q96KF7 97 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 SIGLEC12Q96PQ1 595 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 SH3BGRL3Q9H299 93 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 DKK4Q9UBT3 224 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 GVINP1Q7Z2Y8 2422 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 CFAP54Q96N23 3096 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 C9JQL5 133 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 H3BP45 60 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 MPPED1O15442 326 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 HSPA12AO43301 675 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 GPR137BO60478 399 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 CRYBA1P05813 215 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms