RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 LY6LH3BQJ8 138 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 KCNAB3O43448 404 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 CD28P10747 220 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 GPR50Q13585 617 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 ABCA11PQ4W5N1 156 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 C9orf152Q5JTZ5 239 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 C6orf141Q5SZD1 244 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 HIST2H2BDQ6DRA6 164 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 RAB12Q6IQ22 244 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 CENPVQ7Z7K6 275 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-215ENST00000577085 LYG1Q8N1E2 194 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 RBM14Q96PK6 669 aaKnown RBP12.42□□□□□ -0.42
SF3B3-215ENST00000577085 UQCC2Q9BRT2 126 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 TMED9Q9BVK6 235 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 CST11Q9H112 138 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 BANF2Q9H503 90 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 LINC00574Q9H8X3 128 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 FKBP14Q9NWM8 211 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 ETAA1Q9NY74 926 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 TPRKBQ9Y3C4 175 aa12.42□□□□□ -0.42
SF3B3-215ENST00000577085 SPINT2O43291 252 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 LPLP06858 475 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 MGMTP16455 207 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 IL3RAP26951 378 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 RAB7AP51149 207 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 AQP4P55087 323 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 SPHARQ15513 63 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 TMEM95Q3KNT9 176 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 ACSM3Q53FZ2 586 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 UTF1Q5T230 341 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 RNLSQ5VYX0 342 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 Q6ZS46 218 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 NDUFA11Q86Y39 141 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 PRR18Q8N4B5 295 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 OR4F17Q8NGA8 305 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 OR56B4Q8NH76 319 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 OR4F4Q96R69 305 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 GHRLQ9UBU3 117 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 PEX16Q9Y5Y5 336 aa12.41□□□□□ -0.42
SF3B3-215ENST00000577085 MEGF8Q7Z7M0 2845 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 KIAA2026Q5HYC2 2103 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 A0A1W2PPE3 182 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 ORC5O43913 435 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 MT-ND4P03905 459 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 OPN1MWP04001 364 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 OPN1MW2P0DN77 364 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 OPN1MW3P0DN78 364 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 TMEM11P17152 192 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 RBM48Q5RL73 367 aaKnown RBP12.4□□□□□ -0.42
SF3B3-215ENST00000577085 C6orf183Q5T699 404 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 GLT8D1Q68CQ7 371 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 ZNF497Q6ZNH5 498 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 OR8H3Q8N146 312 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 DRAM1Q8N682 238 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 OR5AU1Q8NGC0 362 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 UFD1Q92890 307 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 FAM46BQ96A09 425 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-215ENST00000577085 WNT10AQ9GZT5 417 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 CCDC90BQ9GZT6 254 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 MOB4Q9Y3A3 225 aa12.4□□□□□ -0.42
SF3B3-215ENST00000577085 FAM90A10PA6NDY2 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A18PA6NE21 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A16PA6NEW6 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A20PA6NIJ5 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A7PA6NKC0 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A12PA8MX19 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A5PA8MXJ8 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A23PA8MXZ1 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 H0YHG0 523 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 CCRL2O00421 344 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 HSD17B6O14756 317 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 PIN1P1O15428 100 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 GAPDHP04406 335 aaKnown RBP12.39□□□□□ -0.43
SF3B3-215ENST00000577085 SNRNP70P08621 437 aaKnown RBP12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A15PP0C7V4 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A13PP0C7W8 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A14PP0C7W9 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A24PP0C7X0 464 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 UBBP0CG47 229 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 HSMCR30P0CW71 290 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 FUT3P21217 361 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 PDLIM3Q53GG5 364 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-215ENST00000577085 SYT6Q5T7P8 510 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-215ENST00000577085 TRAT1Q6PIZ9 186 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 CEACAM19Q7Z692 300 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 MOB3BQ86TA1 216 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 THNSL2Q86YJ6 484 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 C1QL4Q86Z23 238 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 OR52M1Q8NGK5 317 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 UBALD1Q8TB05 177 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 R3HDM4Q96D70 268 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 KCNIP1Q9NZI2 227 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 RCC2Q9P258 522 aaKnown RBP12.39□□□□□ -0.43
SF3B3-215ENST00000577085 GNG12Q9UBI6 72 aa12.39□□□□□ -0.43
SF3B3-215ENST00000577085 IGHV3-43A0A0B4J1X8 118 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 A0A1W2PRX2 142 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 ERICH4A6NGS2 130 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 RGS10O43665 173 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 CA11O75493 328 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms