RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 RUNX1Q01196 453 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZNF691Q5VV52 312 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 OVCH2Q7RTZ1 564 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 SERPINA12Q8IW75 414 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 FAM71E2Q8N5Q1 922 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 LINC00311Q8N616 119 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 C8orf31Q8N9H6 132 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 PXT1Q8NFP0 134 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR52M1Q8NGK5 317 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 PLPPR1Q8TBJ4 325 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 MYOZ3Q8TDC0 251 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 EME1Q96AY2 570 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 HSPB9Q9BQS6 159 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 PLSCR3Q9NRY6 295 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 VSIG4Q9Y279 399 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 SORL1Q92673 2214 aa9.07□□□□□ -0.96
CTDNEP1-212ENST00000576613 TRAV39A0A0B4J263 110 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 DAPL1A0PJW8 107 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 TMEM30CPA0ZSE6 113 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 OVOL1O14753 267 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 MAGEB3O15480 346 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 GYG2O15488 501 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 ATP8B1O43520 1251 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 SAP30O75446 220 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 GYS2P54840 703 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 RSU1Q15404 277 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZSCAN26Q16670 478 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 PIGYQ3MUY2 71 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 DNAL1Q4LDG9 190 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 ARL11Q969Q4 196 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 ISOC1Q96CN7 298 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 MRPL48Q96GC5 212 aaKnown RBP9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 GPER1Q99527 375 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 LYSTQ99698 3801 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 CIB1Q99828 191 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 DPCDQ9BVM2 203 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 FAM192AQ9GZU8 254 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 GABARAPL1Q9H0R8 117 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 GHITMQ9H3K2 345 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 GAR1Q9NY12 217 aaKnown RBP9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZNF107Q9UII5 783 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 POMPQ9Y244 141 aa9.06□□□□□ -0.96
CTDNEP1-212ENST00000576613 EPPK1P58107 5090 aaKnown RBP9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR4C45A6NMZ5 311 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 I3L521 148 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 J3QLW9 94 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 GP9P14770 177 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZNF19P17023 458 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 GABPB1Q06547 395 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 ALKBH1Q13686 389 aaKnown RBP9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 ATP6AP1Q15904 470 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 Q3ZCU0 254 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 LPCAT4Q643R3 524 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZFAND6Q6FIF0 208 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 PARP16Q8N5Y8 322 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZNF491Q8N8L2 437 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 SUMF2Q8NBJ7 301 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 CCDC197Q8NCU1 140 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR6Q1Q8NGQ2 317 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 TNFAIP8L1Q8WVP5 186 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 ST6GALNAC6Q969X2 333 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 MYCBPQ99417 103 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR51J1Q9H342 316 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 GNB4Q9HAV0 340 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 RAB9BQ9NP90 201 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 IMPAD1Q9NX62 359 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 GFOD1Q9NXC2 390 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 SACSQ9NZJ4 4579 aa9.05□□□□□ -0.96
CTDNEP1-212ENST00000576613 TMEM212A6NML5 194 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZNF736B4DX44 427 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 GABRPO00591 440 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 ORC5O43913 435 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR7C1O76099 320 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 SLC2A2P11168 524 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 SPNP16150 400 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 RAB3AP20336 220 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 MYF6P23409 242 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 F2RL1P55085 397 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 GNB1P62873 340 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 MMDQ15546 238 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 ASPHD1Q5U4P2 390 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 SATL1Q86VE3 508 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 ACBD7Q8N6N7 88 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 TSEN15Q8WW01 171 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 DCUN1D4Q92564 292 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 PELI1Q96FA3 418 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 C4orf36Q96KX1 117 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR5B12Q96R08 314 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 GABARAPL3Q9BY60 117 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 KLK15Q9H2R5 256 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 RIBC2Q9H4K1 309 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 IFT22Q9H7X7 185 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 DHDHQ9UQ10 334 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 ST3GAL6Q9Y274 331 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 CSMD3Q7Z407 3707 aa9.04□□□□□ -0.96
CTDNEP1-212ENST00000576613 IGHV3-43A0A0B4J1X8 118 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 C15orf65H3BRN8 121 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 J3QRE1 110 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 LDLRAD4O15165 306 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 HTR3BO95264 441 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms