RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 Q8N7P7 452 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 ARL11Q969Q4 196 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 CYYR1Q96J86 154 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 DCUN1D5Q9BTE7 237 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 ABCG5Q9H222 651 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 HEXA-AS1Q9H8Q6 139 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 CALYQ9NYX4 217 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 KBTBD11-OT1A0A1B0GTJ5 212 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 MFNGO00587 321 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 APOA1P02647 267 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 RBP4P02753 201 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 GSTP1P09211 210 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 IGHV1-8P0DP01 117 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 SRD5A1P18405 259 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 OMGP23515 440 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 CDK2P24941 298 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 NFYBP25208 207 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 DLX6P56179 175 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 GNG2P59768 71 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 PRB3Q04118 309 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 LTC4SQ16873 150 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 TMEM69Q5SWH9 247 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 PRAMEF5Q5TYX0 476 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 OLFML2AQ68BL7 652 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 OR52W1Q6IF63 320 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 C1orf229Q6ZS94 237 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 IZUMO1Q8IYV9 350 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 GAPTQ8N292 157 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 DTX3Q8N9I9 347 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 MCFD2Q8NI22 146 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 RFESDQ8TAC1 157 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 C6orf62Q9GZU0 229 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 C12orf4Q9NQ89 552 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 ADAM30Q9UKF2 790 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 SESN1Q9Y6P5 492 aa11.9□□□□□ -0.5
NPLOC4-218ENST00000574964 MTORP42345 2549 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 SPINT2O43291 252 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 XRCC3O43542 346 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 ORC5O43913 435 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 EIF4EP06730 217 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 COX7A1P24310 79 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 SSTR5P35346 364 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 DLX1P56177 255 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 KLRD1Q13241 179 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 SCGB2A2Q13296 93 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 PNLIPRP3Q17RR3 467 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 C17orf58Q2M2W7 97 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 HEPN1Q6WQI6 88 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 MOB1BQ7L9L4 216 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 PRR18Q8N4B5 295 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 OR13D1Q8NGV5 346 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 HDHD3Q9BSH5 251 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 SUCNR1Q9BXA5 334 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 MS4A7Q9GZW8 240 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 IDI2-AS1Q9NZ38 188 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 NUP50Q9UKX7 468 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 MGAT4AQ9UM21 535 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 KCNK7Q9Y2U2 307 aa11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 FN1P02751 2386 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-218ENST00000574964 CENPVL3A0A0U1RRI6 287 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 A0A1W2PRD5 423 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 A0A1W2PRF3 423 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 A0A1W2PRM7 423 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 NAPSAO96009 420 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 CGB3P0DN86 165 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 CGB7P0DN87 165 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 IGHV4-38-2P0DP08 117 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 HOXB4P17483 251 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 ELK1P19419 428 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 PITPNAQ00169 270 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 ZNF260Q3ZCT1 412 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 HACD4Q5VWC8 232 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 PNKDQ8N490 385 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 C11orf42Q8N5U0 333 aa11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.88□□□□□ -0.51
NPLOC4-218ENST00000574964 TRBV6-6A0A0A6YYG2 114 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 IGHV1-69DA0A0B4J2H0 117 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 C12orf77C9JDV5 145 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 RNASEK-C17orf49H0YIS7 233 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 CTDSP2O14595 271 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 CRLF1O75462 422 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 MMP23AO75900 390 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 IGHV1-69P01742 117 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 FPR2P25090 351 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 LGALS4P56470 323 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 TAS2R20P59543 309 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 KLF17Q5JT82 389 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 BRD3OSQ6XYD6 125 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 ZNF554Q86TJ5 538 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 OR10A7Q8NGE5 316 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 NUDCD2Q8WVJ2 157 aa11.87□□□□□ -0.51
NPLOC4-218ENST00000574964 SLIRPQ9GZT3 109 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms