RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 OCEL1Q9H607 264 aa11.14□□□□□ -0.63
LINC01996-201ENST00000573270 ONECUT1Q9UBC0 465 aa11.14□□□□□ -0.63
LINC01996-201ENST00000573270 LPAR3Q9UBY5 353 aa11.14□□□□□ -0.63
LINC01996-201ENST00000573270 TRAPPC2LQ9UL33 140 aa11.14□□□□□ -0.63
LINC01996-201ENST00000573270 LINC00312Q9Y6C7 94 aa11.14□□□□□ -0.63
LINC01996-201ENST00000573270 DOCK11Q5JSL3 2073 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 MALRD1Q5VYJ5 2156 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 TRGV10A0A0A0MS01 117 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 PPIAL4CA0A0B4J2A2 164 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 hADV38S2A0JD32 116 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 MEIOCA2RUB1 952 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 FUOMA2VDF0 154 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 B4DSR2 109 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 GPR37O15354 613 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 GSTZ1O43708 216 aaPredicted RBP11.13□□□□□ -0.63
LINC01996-201ENST00000573270 CA11O75493 328 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 MT-ND4P03905 459 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 FCER2P06734 321 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 GZMKP49863 264 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 HLA-DRB3P79483 266 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 PAX2Q02962 417 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 MEF2CQ06413 473 aaPredicted RBP11.13□□□□□ -0.63
LINC01996-201ENST00000573270 OXA1LQ15070 435 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 ZNF79Q15937 498 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 CD276Q5ZPR3 534 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 MOB1BQ7L9L4 216 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 C5orf24Q7Z6I8 188 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 CENPSQ8N2Z9 138 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 LINC01356Q8N9X3 169 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 ABHD1Q96SE0 405 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 THAP7Q9BT49 309 aaPredicted RBP11.13□□□□□ -0.63
LINC01996-201ENST00000573270 MMP26Q9NRE1 261 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 CALYQ9NYX4 217 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 COPZ2Q9P299 210 aa11.13□□□□□ -0.63
LINC01996-201ENST00000573270 ZNF230Q9UIE0 474 aaPredicted RBP11.13□□□□□ -0.63
LINC01996-201ENST00000573270 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC01996-201ENST00000573270 NAP1L6A6NFF2 107 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 SULT1C2O00338 296 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 LIPFP07098 398 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 MELTFP08582 738 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 IL7P13232 177 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
LINC01996-201ENST00000573270 FAUP35544 74 aaKnown RBP11.12□□□□□ -0.63
LINC01996-201ENST00000573270 DGCR2P98153 550 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 KRTAP1-1Q07627 177 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 ASAH1Q13510 395 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 PRAMEF5Q5TYX0 476 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 STEAP3Q658P3 488 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 GLCCI1Q86VQ1 547 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 PRR18Q8N4B5 295 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 LY6G5BQ8NDX9 201 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 ZNF714Q96N38 554 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 IFT46Q9NQC8 304 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 OR6C3Q9NZP0 311 aa11.12□□□□□ -0.63
LINC01996-201ENST00000573270 POLR3KQ9Y2Y1 108 aaPredicted RBP11.12□□□□□ -0.63
LINC01996-201ENST00000573270 CELSR1Q9NYQ6 3014 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 TRBV6-6A0A0A6YYG2 114 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 LPLP06858 475 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 DTYMKP23919 212 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 PRSS3P35030 304 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 DVL1P1P54792 670 aaPredicted RBP11.11□□□□□ -0.63
LINC01996-201ENST00000573270 DLX1P56177 255 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 DLX6P56179 175 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 PRB3Q04118 309 aaPredicted RBP11.11□□□□□ -0.63
LINC01996-201ENST00000573270 HMGN3Q15651 99 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 LTC4SQ16873 150 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 C6orf183Q5T699 404 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 ZNF57Q68EA5 555 aaPredicted RBP11.11□□□□□ -0.63
LINC01996-201ENST00000573270 BTNL3Q6UXE8 466 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 GVQW1Q8N7I0 195 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 OR52I2Q8NH67 350 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 ENKURQ8TC29 256 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 TMEM186Q96B77 213 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 GAL3ST2Q9H3Q3 398 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 SCPEP1Q9HB40 452 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 Q9N2K0 584 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 MBNL3Q9NUK0 354 aaKnown RBP11.11□□□□□ -0.63
LINC01996-201ENST00000573270 HIF1ANQ9NWT6 349 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 UBE2J1Q9Y385 318 aaPredicted RBP11.11□□□□□ -0.63
LINC01996-201ENST00000573270 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
LINC01996-201ENST00000573270 IGKV1D-8A0A087WSZ0 117 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 TRAV20A0A0B4J274 112 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 FAM172BPA6NC97 362 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 ZNF729A6NN14 1252 aaPredicted RBP11.1□□□□□ -0.63
LINC01996-201ENST00000573270 GABARAPH6UMI1 98 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 RBBP9O75884 186 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 OMGP23515 440 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 GDNFP39905 211 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 ERVFRD-1P60508 538 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 DYRK1AQ13627 763 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 C17orf58Q2M2W7 97 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 DCAF12L2Q5VW00 463 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 ZNF782Q6ZMW2 699 aaPredicted RBP11.1□□□□□ -0.63
LINC01996-201ENST00000573270 TOMM5Q8N4H5 51 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 KIR3DL3Q8N743 410 aa11.1□□□□□ -0.63
LINC01996-201ENST00000573270 OR1L1Q8NH94 360 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms