RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TOR1AO14656 332 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 MAS1P04201 325 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 GLAP06280 429 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 GZMHP20718 246 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 HSPA13P48723 471 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 ARHGDIBP52566 201 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 C2orf68Q2NKX9 166 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 ACSM3Q53FZ2 586 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 TPTE2P1Q5T6R2 138 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 ZNF497Q6ZNH5 498 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 GAPTQ8N292 157 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 SGCDQ92629 289 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 MMP28Q9H239 520 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 ISYNA1Q9NPH2 558 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 GHRLQ9UBU3 117 aa13.83□□□□□ -0.2
SMG6-212ENST00000573153 TRAV39A0A0B4J263 110 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 FAM90A9PA6NNJ1 464 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 C15orf65H3BRN8 121 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 H3BUI4 141 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 J3QR06 171 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 CD28P10747 220 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 BRS3P32247 399 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 SSTR5P35346 364 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 DIAPH2-AS1Q14236 149 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 AWAT2Q6E213 333 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 FAM53AQ6NSI3 398 aaPredicted RBP13.82□□□□□ -0.2
SMG6-212ENST00000573153 CCDC144NLQ6NUI1 221 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 OR52M1Q8NGK5 317 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 FAM110DQ8TAY7 271 aaPredicted RBP13.82□□□□□ -0.2
SMG6-212ENST00000573153 MRGPRDQ8TDS7 321 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 PRSS22Q9GZN4 317 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 LIN7BQ9HAP6 207 aa13.82□□□□□ -0.2
SMG6-212ENST00000573153 AMMECR1Q9Y4X0 333 aaPredicted RBP13.82□□□□□ -0.2
SMG6-212ENST00000573153 A0A1W2PPI3 338 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 ORC5O43913 435 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 MT-ND4P03905 459 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 CSF1P09603 554 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 UCHL1P09936 223 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 VSIG10L2P0DP72 767 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 MGMTP16455 207 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 CRHBPP24387 322 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 TPBGQ13641 420 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 RBM39Q14498 530 aaKnown RBP13.81□□□□□ -0.2
SMG6-212ENST00000573153 INSL4Q14641 139 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 TCTEX1D4Q5JR98 221 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 C1orf100Q5SVJ3 147 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 Q6ZTK2 550 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 LRRTM1Q86UE6 522 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 C8orf31Q8N9H6 132 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 TMEM104Q8NE00 496 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 LEAP2Q969E1 77 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 Q96M66 194 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 PSG11Q9UQ72 335 aa13.81□□□□□ -0.2
SMG6-212ENST00000573153 RGS10O43665 173 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 CA11O75493 328 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 UBBP0CG47 229 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 NFYBP25208 207 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 MED22Q15528 200 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 Q3ZCU0 254 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 ATAD3CQ5T2N8 411 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 PRSS48Q7RTY5 328 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 THNSL2Q86YJ6 484 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
SMG6-212ENST00000573153 MCRIP1C9JLW8 97 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 OR2F2O95006 317 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 IGHV3-7P01780 117 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 OPN1MWP04001 364 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 OPN1MW2P0DN77 364 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 OPN1MW3P0DN78 364 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 SRMP19623 302 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 MNDAP41218 407 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 LOXL3P58215 753 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 TRAM1Q15629 374 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 TMEM30BQ3MIR4 351 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 FAM27D1Q5T7N8 215 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 SAMD5Q5TGI4 173 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 SIGIRRQ6IA17 410 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 IZUMO2Q6UXV1 221 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 C1QL4Q86Z23 238 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 LINC00311Q8N616 119 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 RFESDQ8TAC1 157 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 UFD1Q92890 307 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 AKR1E2Q96JD6 320 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 RBM14Q96PK6 669 aaKnown RBP13.79□□□□□ -0.2
SMG6-212ENST00000573153 CITED2Q99967 270 aaPredicted RBP13.79□□□□□ -0.2
SMG6-212ENST00000573153 TMED9Q9BVK6 235 aa13.79□□□□□ -0.2
SMG6-212ENST00000573153 PLXNB1O43157 2135 aa13.78□□□□□ -0.2
SMG6-212ENST00000573153 ERICH4A6NGS2 130 aa13.78□□□□□ -0.2
SMG6-212ENST00000573153 SH2D7A6NKC9 451 aaPredicted RBP13.78□□□□□ -0.2
SMG6-212ENST00000573153 FBXO24O75426 580 aa13.78□□□□□ -0.2
SMG6-212ENST00000573153 CRTAPO75718 401 aaPredicted RBP13.78□□□□□ -0.2
SMG6-212ENST00000573153 FUT3P21217 361 aa13.78□□□□□ -0.2
SMG6-212ENST00000573153 PSMA1P25786 263 aaKnown RBP13.78□□□□□ -0.2
SMG6-212ENST00000573153 MLLT11Q13015 90 aaPredicted RBP13.78□□□□□ -0.2
SMG6-212ENST00000573153 MADCAM1Q13477 382 aa13.78□□□□□ -0.2
SMG6-212ENST00000573153 BEAN1Q3B7T3 259 aa13.78□□□□□ -0.2
SMG6-212ENST00000573153 HSD17B12Q53GQ0 312 aa13.78□□□□□ -0.2
SMG6-212ENST00000573153 RBM48Q5RL73 367 aaKnown RBP13.78□□□□□ -0.2
SMG6-212ENST00000573153 KPRPQ5T749 579 aaPredicted RBP13.78□□□□□ -0.2
SMG6-212ENST00000573153 LIPKQ5VXJ0 399 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms