RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 BTNL8Q6UX41 500 aa13.81□□□□□ -0.2
POLR2A-201ENST00000572844 FAM169BQ8N8A8 192 aa13.81□□□□□ -0.2
POLR2A-201ENST00000572844 OR8G5Q8NG78 346 aa13.81□□□□□ -0.2
POLR2A-201ENST00000572844 LYPD6BQ8NI32 183 aa13.81□□□□□ -0.2
POLR2A-201ENST00000572844 AKR1E2Q96JD6 320 aa13.81□□□□□ -0.2
POLR2A-201ENST00000572844 MBNL3Q9NUK0 354 aaKnown RBP13.81□□□□□ -0.2
POLR2A-201ENST00000572844 COQ3Q9NZJ6 369 aa13.81□□□□□ -0.2
POLR2A-201ENST00000572844 LOC105371267A0A1B0GV96 52 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 C1QTNF9BB2RNN3 333 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 MED6O75586 246 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 IGLV1-44P01699 117 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 KITLGP21583 273 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 CAV2P51636 162 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 ZNF273Q14593 569 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 ZNF169Q14929 603 aaPredicted RBP13.8□□□□□ -0.2
POLR2A-201ENST00000572844 RTP5Q14D33 572 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 P2RY6Q15077 328 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 ALKBH6Q3KRA9 238 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 FIP1L1Q6UN15 594 aaKnown RBP13.8□□□□□ -0.2
POLR2A-201ENST00000572844 SPAG16Q8N0X2 631 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.8□□□□□ -0.2
POLR2A-201ENST00000572844 PLPPR1Q8TBJ4 325 aa13.8□□□□□ -0.2
POLR2A-201ENST00000572844 NARS2Q96I59 477 aaKnown RBP13.8□□□□□ -0.2
POLR2A-201ENST00000572844 FAM212BQ9NTI7 297 aaPredicted RBP13.8□□□□□ -0.2
POLR2A-201ENST00000572844 PURGQ9UJV8 347 aaKnown RBP13.8□□□□□ -0.2
POLR2A-201ENST00000572844 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
POLR2A-201ENST00000572844 ABCD4O14678 606 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 CDIPTO14735 213 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 NXPH2O95156 264 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 SLC25A6P12236 298 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 MPV17P39210 176 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 LPAR6P43657 344 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 NOVA1P51513 510 aaKnown RBP13.79□□□□□ -0.2
POLR2A-201ENST00000572844 BOLLQ8N9W6 283 aaKnown RBP13.79□□□□□ -0.2
POLR2A-201ENST00000572844 SMIM3Q9BZL3 60 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 BCL2L14Q9BZR8 327 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 TLNRD1Q9H1K6 362 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 WFDC1Q9HC57 220 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 PLA2G2EQ9NZK7 142 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 SIRPB1O00241 398 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 WDR1O75083 606 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 CGAP01215 116 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 SPP1P10451 314 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 LMO1P25800 156 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 F2RL1P55085 397 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 ID3Q02535 119 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 TCF15Q12870 199 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 HMGN3Q15651 99 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 IGFBP7Q16270 282 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 ATRAIDQ6UW56 229 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 OR2C3Q8N628 320 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 OR10V1Q8NGI7 309 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 BSCL2Q96G97 398 aaPredicted RBP13.79□□□□□ -0.2
POLR2A-201ENST00000572844 TAAR6Q96RI8 345 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 CXXC4Q9H2H0 198 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 DKK4Q9UBT3 224 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 ERRFI1Q9UJM3 462 aaPredicted RBP13.79□□□□□ -0.2
POLR2A-201ENST00000572844 ARID1AO14497 2285 aa13.79□□□□□ -0.2
POLR2A-201ENST00000572844 MBD3L4A6NDZ8 208 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-201ENST00000572844 MBD3L3A6NE82 208 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-201ENST00000572844 MBD3L5A6NJ08 208 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-201ENST00000572844 FBXO24O75426 580 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 TNFSF13O75888 250 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 CEACAM1P13688 526 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 SPINK2P20155 84 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 RAB5CP51148 216 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 DEFA5Q01523 94 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 FOXF2Q12947 444 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 SVBPQ8N300 66 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 MBD3L2Q8NHZ7 208 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-201ENST00000572844 ZNF71Q9NQZ8 489 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-201ENST00000572844 TAAR3PQ9P1P4 343 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 PROCRQ9UNN8 238 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 A0A1B0GWJ7 208 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 MLNRO43193 412 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 ADAM20O43506 726 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 EWSR1Q01844 656 aaKnown RBP eCLIP13.78□□□□□ -0.2
POLR2A-201ENST00000572844 NKX6-2Q9C056 277 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-201ENST00000572844 SLC25A31Q9H0C2 315 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 HRH4Q9H3N8 390 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 PLEKHF2Q9H8W4 249 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 TRAPPC2LQ9UL33 140 aa13.78□□□□□ -0.2
POLR2A-201ENST00000572844 H0YL77 283 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 AGFG2O95081 481 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 HAND1O96004 215 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 CECR9P0C854 216 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 DANCRP0C864 163 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 TESK1Q15569 626 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 MBNL2Q5VZF2 373 aaKnown RBP13.77□□□□□ -0.21
POLR2A-201ENST00000572844 CXorf67Q86X51 503 aaPredicted RBP13.77□□□□□ -0.21
POLR2A-201ENST00000572844 C11orf53Q8IXP5 236 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 COMMD1Q8N668 190 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 PRSS33Q8NF86 280 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 PRR7Q8TB68 274 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 STARD4Q96DR4 205 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 TSNAXQ99598 290 aaKnown RBP13.77□□□□□ -0.21
POLR2A-201ENST00000572844 SEC11CQ9BY50 192 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 LYRM2Q9NU23 88 aaPredicted RBP13.77□□□□□ -0.21
POLR2A-201ENST00000572844 UQCC1Q9NVA1 299 aa13.77□□□□□ -0.21
POLR2A-201ENST00000572844 A0A1B0GU03 582 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms