RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CA2P00918 260 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 IGHMP01871 453 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 SERPINE1P05121 402 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 TNFRSF1BP20333 461 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 IGHV1-2P23083 117 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 APLNRP35414 380 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 P2RX1P51575 399 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 EMP1P54849 157 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 IL15RAQ13261 267 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 FCN2Q15485 313 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 OR8B8Q15620 311 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 C17orf58Q2M2W7 97 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 WDR38Q5JTN6 314 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC25A30Q5SVS4 291 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 UNQ9370/PRO34162Q6UXP9 181 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 STRADAQ7RTN6 431 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 PIP4P1Q86T03 277 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 GGNQ86UU5 652 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 OR5A1Q8NGJ0 315 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 OR13A1Q8NGR1 328 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 OR9G1Q8NH87 305 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 OR5K1Q8NHB7 308 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 MBD3L1Q8WWY6 194 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 CCL17Q92583 94 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 REEP6Q96HR9 211 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 OR52B2Q96RD2 323 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 SFXN3Q9BWM7 321 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 SRMSQ9H3Y6 488 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 NOX3Q9HBY0 568 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 UQCC1Q9NVA1 299 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 SIGLEC7Q9Y286 467 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 WASHC3Q9Y3C0 194 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 HES2Q9Y543 173 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 PRSS21Q9Y6M0 314 aa3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 EIF4G3O43432 1585 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-210ENST00000572787 BRCA1P38398 1863 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 TDRD15B5MCY1 1934 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 TRAV36DV7A0A075B6V5 113 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 IGHV1OR15-1A0A075B7D0 117 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 TRAV26-2A0A0B4J265 109 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 SHISA9B4DS77 424 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 FAM107AO95990 144 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 IGF2P01344 180 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 LGALS1P09382 135 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 ORM2P19652 201 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 TAS2R46P59540 309 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 NCALDP61601 193 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 HLA-DRB3P79483 266 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 CYCSP99999 105 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 FABP5Q01469 135 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 TMEM267Q0VDI3 215 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 FZD2Q14332 565 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC10A1Q14973 349 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 LTC4SQ16873 150 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 Q499Y3 187 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 CENPWQ5EE01 88 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 DNLZQ5SXM8 178 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 HAGHLQ6PII5 290 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 PLET1Q6UQ28 207 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 GDPD1Q8N9F7 314 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 OR8B12Q8NGG6 310 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 OR5P3Q8WZ94 311 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 TAF15Q92804 592 aaKnown RBP eCLIP3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 TM4SF18Q96CE8 201 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 GPR146Q96CH1 333 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 PLEKHB2Q96CS7 222 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 MALSU1Q96EH3 234 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC35E1Q96K37 410 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 OR7D2Q96RA2 312 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 PRSS27Q9BQR3 290 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 PDCD10Q9BUL8 212 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 LRRC61Q9BV99 259 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 C19orf24Q9BVV8 132 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 CHST6Q9GZX3 395 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 CLCF1Q9UBD9 225 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 BTRCQ9Y297 605 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 UGT2A1Q9Y4X1 527 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 VIRMAQ69YN4 1812 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 UHRF1BP1LA0JNW5 1464 aa3.92□□□□□ -1.78
TOPBP1-210ENST00000572787 DHX57Q6P158 1386 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 A0A0J9YXV3 536 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 WI2-2373I1.2A0A1W2PRP0 233 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 NKX2-6A6NCS4 301 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 SIGLEC16A6NMB1 481 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF850A8MQ14 1090 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 H3BP45 60 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 K7N7A8 449 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 PROP1O75360 226 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 PIAS1O75925 651 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 OR8U8P0C7N1 319 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 FGF6P10767 208 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 MPGP29372 298 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 AQP1P29972 269 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 SNRPD2P62316 118 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 MRPS10P82664 201 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 FKBP3Q00688 224 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 PAX8Q06710 450 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 HNRNPA0Q13151 305 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 ARFRP1Q13795 201 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms