RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 AP3S1Q92572 193 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 LHX4Q969G2 390 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 ZMAT3Q9HA38 289 aaKnown RBP18.04■□□□□ 0.48
RAB40B-207ENST00000572603 COMMD3Q9UBI1 195 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 ZFHX3Q15911 3703 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 IGHV3OR16-10A0A075B7F0 116 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 TRBV6-6A0A0A6YYG2 114 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 KBTBD11-OT1A0A1B0GTJ5 212 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 NPIPB11E5RHQ5 1161 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 SCGNO76038 276 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 EIF4EP06730 217 aaKnown RBP18.03■□□□□ 0.48
RAB40B-207ENST00000572603 RCC1P18754 421 aaPredicted RBP18.03■□□□□ 0.48
RAB40B-207ENST00000572603 CHRFAM7AQ494W8 412 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 BAIAP2L2Q6UXY1 529 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 HEPN1Q6WQI6 88 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 TEX29Q8N6K0 151 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 BEX2Q9BXY8 128 aa18.03■□□□□ 0.48
RAB40B-207ENST00000572603 SLIRPQ9GZT3 109 aaKnown RBP18.03■□□□□ 0.48
RAB40B-207ENST00000572603 ELF5Q9UKW6 265 aaPredicted RBP18.03■□□□□ 0.48
RAB40B-207ENST00000572603 A0A075B6Q4 140 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 A0A0A6YYH2 397 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 A6NJ64 397 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 C12orf77C9JDV5 145 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 OMGP23515 440 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 CDK2P24941 298 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 ZNF260Q3ZCT1 412 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 UTF1Q5T230 341 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 RUSC1-AS1Q66K80 236 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 ZNF565Q8N9K5 539 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 KIRREL1Q96J84 757 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 CMTM3Q96MX0 182 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 C12orf4Q9NQ89 552 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 TRAPPC2LQ9UL33 140 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 SESN1Q9Y6P5 492 aa18.02■□□□□ 0.48
RAB40B-207ENST00000572603 hCG_1809904A0A1W2PP81 198 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 A0A1W2PPE2 198 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 A0A1W2PR64 198 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 A0A1W2PRV1 198 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 SERPINE3A8MV23 424 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 ORC5O43913 435 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 HPGDSO60760 199 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 SOX6P35712 828 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 SRP14P37108 136 aaKnown RBP18.01■□□□□ 0.47
RAB40B-207ENST00000572603 TUSC1Q2TAM9 212 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 NCR3LG1Q68D85 454 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 C5orf24Q7Z6I8 188 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 PDZD9Q8IXQ8 264 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 UBALD1Q8TB05 177 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 CMSS1Q9BQ75 279 aaKnown RBP18.01■□□□□ 0.47
RAB40B-207ENST00000572603 NUP50Q9UKX7 468 aa18.01■□□□□ 0.47
RAB40B-207ENST00000572603 CUBNO60494 3623 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 IGHV1-69DA0A0B4J2H0 117 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 IGHV1-69P01742 117 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 APOA1P02647 267 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 GSTP1P09211 210 aaKnown RBP18■□□□□ 0.47
RAB40B-207ENST00000572603 SRD5A1P18405 259 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 HMGN3Q15651 99 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 CDNFQ49AH0 187 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 C6orf183Q5T699 404 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 GPR157Q5UAW9 335 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 BRD3OSQ6XYD6 125 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 PNKDQ8N490 385 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 RFESDQ8TAC1 157 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 MIXL1Q9H2W2 232 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 RIMS4Q9H426 269 aaPredicted RBP18■□□□□ 0.47
RAB40B-207ENST00000572603 IDI2-AS1Q9NZ38 188 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 NDUFA13Q9P0J0 144 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 ZNF69Q9UC07 566 aa18■□□□□ 0.47
RAB40B-207ENST00000572603 TRAV18A0A075B6X5 111 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 TMEM235A6NFC5 223 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 ELK1P19419 428 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 GZMHP20718 246 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 EPHA1P21709 976 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 COX7A1P24310 79 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 ARL6IP1Q15041 203 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 MZT2AQ6P582 158 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 TRAT1Q6PIZ9 186 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 C9orf139Q6ZV77 190 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 MOB1BQ7L9L4 216 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 ZNF554Q86TJ5 538 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 IZUMO1Q8IYV9 350 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 PIP4P2Q8N4L2 257 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 ARL11Q969Q4 196 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 NXF2Q9GZY0 626 aaKnown RBP17.99■□□□□ 0.47
RAB40B-207ENST00000572603 TMEM133Q9H2Q1 129 aa17.99■□□□□ 0.47
RAB40B-207ENST00000572603 CHMP1AQ9HD42 196 aaPredicted RBP17.99■□□□□ 0.47
RAB40B-207ENST00000572603 SOX21Q9Y651 276 aaPredicted RBP17.99■□□□□ 0.47
RAB40B-207ENST00000572603 A0A087X0M5 115 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 A0A1B0GX30 115 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 ODF3BA8MYP8 253 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 F2RL2O00254 374 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 XRCC3O43542 346 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 SSX5O60225 188 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 HBZP02008 142 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 FCGR3AP08637 254 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 CD3GP09693 182 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 FAM157CP0CG43 387 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 CD34P28906 385 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 UBE2E1P51965 193 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 GUCA2AQ02747 115 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms