RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MYF6P23409 242 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 GABPB1Q06547 395 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-206ENST00000572083 KIAA0141Q14154 515 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-206ENST00000572083 KISS1Q15726 138 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 SRSF7Q16629 238 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCDC40-206ENST00000572083 PIGYQ3MUY2 71 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 LPCAT4Q643R3 524 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 ZNF491Q8N8L2 437 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 UBE2E2Q96LR5 201 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 TM2D3Q9BRN9 247 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 ZCCHC4Q9H5U6 513 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 FAM118AQ9NWS6 357 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 ZNF581Q9P0T4 197 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 OR5H8P0DN80 308 aa15.39■□□□□ 0.05
CCDC40-206ENST00000572083 T-ENOLP0DO92 83 aa15.39■□□□□ 0.05
CCDC40-206ENST00000572083 CD1BP29016 333 aa15.39■□□□□ 0.05
CCDC40-206ENST00000572083 FLOT2Q14254 428 aa15.39■□□□□ 0.05
CCDC40-206ENST00000572083 TMEM65Q6PI78 240 aa15.39■□□□□ 0.05
CCDC40-206ENST00000572083 ALX4Q9H161 411 aaPredicted RBP15.39■□□□□ 0.05
CCDC40-206ENST00000572083 EDA2RQ9HAV5 297 aa15.39■□□□□ 0.05
CCDC40-206ENST00000572083 ZNF107Q9UII5 783 aaPredicted RBP15.39■□□□□ 0.05
CCDC40-206ENST00000572083 VSIG4Q9Y279 399 aa15.39■□□□□ 0.05
CCDC40-206ENST00000572083 WSB1Q9Y6I7 421 aa15.39■□□□□ 0.05
CCDC40-206ENST00000572083 IGHV3-43A0A0B4J1X8 118 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 G3V318 75 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 SDCBPO00560 298 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-206ENST00000572083 HTR1AP08908 422 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 IGHV3-43DP0DP04 118 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 GYS2P54840 703 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 GNGT1P63211 74 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 RUNX1Q01196 453 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 PAX5Q02548 391 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 OR8H1Q8NGG4 311 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 OR10K1Q8NGX5 313 aa15.38■□□□□ 0.05
CCDC40-206ENST00000572083 ALMS1Q8TCU4 4167 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 PLECQ15149 4684 aaKnown RBP15.37■□□□□ 0.05
CCDC40-206ENST00000572083 IL3RAP26951 378 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 PPIFP30405 207 aaKnown RBP15.37■□□□□ 0.05
CCDC40-206ENST00000572083 KCNJ3P48549 501 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 SLURP1P55000 103 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 IL13RA2Q14627 380 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 ZNF691Q5VV52 312 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 ELP2Q6IA86 826 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 LINC00311Q8N616 119 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 DLX4Q92988 240 aaPredicted RBP15.37■□□□□ 0.05
CCDC40-206ENST00000572083 ST6GALNAC6Q969X2 333 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 ZNF580Q9UK33 172 aa15.37■□□□□ 0.05
CCDC40-206ENST00000572083 TCRBV3S1A0A5B6 114 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 C15orf65H3BRN8 121 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 SLC31A2O15432 143 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 SULT1B1O43704 296 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 KDM4DQ6B0I6 523 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 FDX2Q6P4F2 183 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 SUMF2Q8NBJ7 301 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 ARL11Q969Q4 196 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 EME1Q96AY2 570 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 DPCDQ9BVM2 203 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-206ENST00000572083 GFOD1Q9NXC2 390 aa15.36■□□□□ 0.05
CCDC40-206ENST00000572083 LDLRAD4O15165 306 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 MMDQ15546 238 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 OR6Q1Q8NGQ2 317 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 CCDC107Q8WV48 283 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 TNFAIP8L1Q8WVP5 186 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 ARPC1AQ92747 370 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 KRTAP17-1Q9BYP8 105 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 FAM192AQ9GZU8 254 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 PARP11Q9NR21 331 aa15.35■□□□□ 0.05
CCDC40-206ENST00000572083 OR4C45A6NMZ5 311 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 G3V2T6 193 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 GABRPO00591 440 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 ATP6V0E1O15342 81 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 SLC16A6O15403 523 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 IGLV1-40P01703 118 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 IGHV4-30-4P0DP06 118 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 POLR2IP36954 125 aaKnown RBP15.34■□□□□ 0.05
CCDC40-206ENST00000572083 RAB9AP51151 201 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 CCR9P51686 369 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 RSU1Q15404 277 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 HAPLN4Q86UW8 402 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 C8orf31Q8N9H6 132 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 PXT1Q8NFP0 134 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 OR52M1Q8NGK5 317 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 GPER1Q99527 375 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 CIB1Q99828 191 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 OR51J1Q9H342 316 aa15.34■□□□□ 0.05
CCDC40-206ENST00000572083 DAPL1A0PJW8 107 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 TMEM30CPA0ZSE6 113 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 LINC01619G3V211 115 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 J3QLW9 94 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 TXNL1O43396 289 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 ZNF19P17023 458 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 GZMHP20718 246 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 TMED1Q13445 227 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 ACSM6Q6P461 480 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 KCTD20Q7Z5Y7 419 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 SATL1Q86VE3 508 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 SERPINA12Q8IW75 414 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 OR5D14Q8NGL3 314 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 OR8J1Q8NGP2 316 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 RFKQ969G6 155 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms