RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 NKX6-3A6NJ46 265 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 CEACAM18A8MTB9 384 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 MCRIP1C9JLW8 97 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 GABARAPH6UMI1 98 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 ADAM20O43506 726 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 NAPSAO96009 420 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 FSHBP01225 129 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 TK1P04183 234 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 CD40LGP29965 261 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 PRSS3P35030 304 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 MRPS10P82664 201 aaKnown RBP11.33□□□□□ -0.6
RPAIN-209ENST00000571558 DGCR2P98153 550 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 RBM39Q14498 530 aaKnown RBP11.33□□□□□ -0.6
RPAIN-209ENST00000571558 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 ZNF497Q6ZNH5 498 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 OR8H2Q8N162 312 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 GDPD1Q8N9F7 314 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 ASCC1Q8N9N2 400 aaKnown RBP11.33□□□□□ -0.6
RPAIN-209ENST00000571558 GPX8Q8TED1 209 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 SMIM4Q8WVI0 70 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 NUDCD2Q8WVJ2 157 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 COQ2Q96H96 371 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 MED30Q96HR3 178 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 HDHD3Q9BSH5 251 aaPredicted RBP11.33□□□□□ -0.6
RPAIN-209ENST00000571558 FAM234AQ9H0X4 552 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 SCPEP1Q9HB40 452 aa11.33□□□□□ -0.6
RPAIN-209ENST00000571558 ISPDA4D126 451 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 F5H0A9 414 aaPredicted RBP11.32□□□□□ -0.6
RPAIN-209ENST00000571558 J3QRK9 145 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 SULT1C2O00338 296 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 KCNJ3P48549 501 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 ATXN7L3Q14CW9 347 aaPredicted RBP11.32□□□□□ -0.6
RPAIN-209ENST00000571558 PYDC2Q56P42 97 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 RSBN1Q5VWQ0 802 aaPredicted RBP11.32□□□□□ -0.6
RPAIN-209ENST00000571558 SLC36A1Q7Z2H8 476 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 Q8N402 240 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 FGFRL1Q8N441 504 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 SPICQ8N5J4 248 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 OR52I2Q8NH67 350 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 C7orf69Q9H7B7 122 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 UNKLQ9H9P5 680 aaKnown RBP11.32□□□□□ -0.6
RPAIN-209ENST00000571558 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 ANAPC10Q9UM13 185 aa11.32□□□□□ -0.6
RPAIN-209ENST00000571558 RBMX2Q9Y388 322 aaKnown RBP11.32□□□□□ -0.6
RPAIN-209ENST00000571558 TRBV6-6A0A0A6YYG2 114 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 PPIAL4CA0A0B4J2A2 164 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 MGST3O14880 152 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 LANCL1O43813 399 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 LPLP06858 475 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 WNT2P09544 360 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 GNG2P59768 71 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 GRK1Q15835 563 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 BAK1Q16611 211 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 SLC35E4Q6ICL7 350 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 MRPL30Q8TCC3 161 aaKnown RBP11.31□□□□□ -0.6
RPAIN-209ENST00000571558 FCAMRQ8WWV6 532 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 TRIM63Q969Q1 353 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 OCSTAMPQ9BR26 566 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 PATZ1Q9HBE1 687 aaKnown RBP11.31□□□□□ -0.6
RPAIN-209ENST00000571558 C12orf4Q9NQ89 552 aa11.31□□□□□ -0.6
RPAIN-209ENST00000571558 CLDN34H7C241 214 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 MT-ND4P03905 459 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 CD3GP09693 182 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 DTYMKP23919 212 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 AESQ08117 197 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 ARFRP1Q13795 201 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 ZNF880Q6PDB4 577 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 TRAPPC6BQ86SZ2 158 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 TMEM185AQ8NFB2 350 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 OR5D13Q8NGL4 314 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 PPP1R35Q8TAP8 253 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 NEK7Q8TDX7 302 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 CMSS1Q9BQ75 279 aaKnown RBP11.3□□□□□ -0.6
RPAIN-209ENST00000571558 CCDC32Q9BV29 185 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 NCOR1P1Q9H4R4 102 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 SLC25A10Q9UBX3 287 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-209ENST00000571558 KLK11Q9UBX7 282 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 MTFP1Q9UDX5 166 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 MIOXQ9UGB7 285 aa11.3□□□□□ -0.6
RPAIN-209ENST00000571558 PRKDCP78527 4128 aaKnown RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 DVL1O14640 695 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 ORC5O43913 435 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 IGHV2-5P01817 119 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 RNASE1P07998 156 aaKnown RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 FCGR3AP08637 254 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 IL7P13232 177 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 RPS2P15880 293 aaKnown RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 NAT1P18440 290 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 ERP29P30040 261 aaKnown RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 GLIPR1P48060 266 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 P2RX3P56373 397 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 RNASE12Q5GAN4 147 aaKnown RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 KRBOX4Q5JUW0 171 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 GVQW1Q8N7I0 195 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 NEIL1Q96FI4 390 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 THAP7Q9BT49 309 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 RIMS4Q9H426 269 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 MBNL3Q9NUK0 354 aaKnown RBP11.29□□□□□ -0.6
RPAIN-209ENST00000571558 OPN4Q9UHM6 478 aa11.29□□□□□ -0.6
RPAIN-209ENST00000571558 KIF25Q9UIL4 384 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms