RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 MADCAM1Q13477 382 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 TCTEX1D4Q5JR98 221 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 NHLRC3Q5JS37 347 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 KHDC1LQ5JSQ8 128 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 AWAT2Q6E213 333 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 CCDC144NLQ6NUI1 221 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 OR10X1Q8NGY0 326 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 ARL11Q969Q4 196 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 RBMXL1Q96E39 390 aaKnown RBP10.95□□□□□ -0.66
RAB40B-204ENST00000571554 NCOR1P1Q9H4R4 102 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 C8orf4Q9NR00 106 aa10.95□□□□□ -0.66
RAB40B-204ENST00000571554 IGHV3-72A0A0B4J1Y9 119 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 TCRBV4S1A1TA0A5B7 111 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 OOSP1A8MZH6 123 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 SDCBPO00560 298 aaPredicted RBP10.94□□□□□ -0.66
RAB40B-204ENST00000571554 PIN1P1O15428 100 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 FAM106CPP0CH98 169 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 GTF2F2P13984 249 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 WNT4P56705 351 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 INSL4Q14641 139 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 MPV17LQ2QL34 196 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 OR4F17Q8NGA8 305 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 DERL3Q96Q80 235 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 IFT22Q9H7X7 185 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 LINC00574Q9H8X3 128 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 PAK1IP1Q9NWT1 392 aaPredicted RBP10.94□□□□□ -0.66
RAB40B-204ENST00000571554 CNOT2Q9NZN8 540 aaKnown RBP10.94□□□□□ -0.66
RAB40B-204ENST00000571554 MOB4Q9Y3A3 225 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 HSPE1-MOB4S4R3N1 261 aa10.94□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A18PA6NE21 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A16PA6NEW6 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A20PA6NIJ5 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A9PA6NNJ1 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A12PA8MX19 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A5PA8MXJ8 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 C15orf65H3BRN8 121 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 AIPO00170 330 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 CASQ2O14958 399 aaPredicted RBP10.93□□□□□ -0.66
RAB40B-204ENST00000571554 ZNF780AO75290 641 aaPredicted RBP10.93□□□□□ -0.66
RAB40B-204ENST00000571554 GPX5O75715 221 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 IGKV1D-33P01593 117 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 IGKV1-33P01594 117 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A15PP0C7V4 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A13PP0C7W8 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A14PP0C7W9 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM90A24PP0C7X0 464 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 TMEM11P17152 192 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 TAS2R43P59537 309 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 CD83Q01151 205 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 PAX5Q02548 391 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 ZNF497Q6ZNH5 498 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 MOB3BQ86TA1 216 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 LINC00596Q86U02 117 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 PRR18Q8N4B5 295 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 TMEM104Q8NE00 496 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 OR4K15Q8NH41 348 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FBLIM1Q8WUP2 373 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 SGCDQ92629 289 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 MYDGFQ969H8 173 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 FAM46BQ96A09 425 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 SELENOIQ9C0D9 397 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 NKX1-2Q9UD57 310 aaPredicted RBP10.93□□□□□ -0.66
RAB40B-204ENST00000571554 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 NOTCH3Q9UM47 2321 aa10.93□□□□□ -0.66
RAB40B-204ENST00000571554 CCRL2O00421 344 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 HSD17B6O14756 317 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 SLC31A2O15432 143 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 CRTAPO75718 401 aaPredicted RBP10.92□□□□□ -0.66
RAB40B-204ENST00000571554 MT-ND4P03905 459 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 PF4V1P10720 104 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 FAM27D1Q5T7N8 215 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 SYT6Q5T7P8 510 aaPredicted RBP10.92□□□□□ -0.66
RAB40B-204ENST00000571554 RAB12Q6IQ22 244 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 C5orf24Q7Z6I8 188 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 ZNF329Q86UD4 541 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 NANOGP1Q8N7R0 232 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 OR10A7Q8NGE5 316 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 OR10V1Q8NGI7 309 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 NOL4LQ96MY1 436 aaPredicted RBP10.92□□□□□ -0.66
RAB40B-204ENST00000571554 PCDHB16Q9NRJ7 776 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 PLCXD1Q9NUJ7 323 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 ETAA1Q9NY74 926 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 TRAPPC2LQ9UL33 140 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 PEX16Q9Y5Y5 336 aa10.92□□□□□ -0.66
RAB40B-204ENST00000571554 IGHV1-3A0A0C4DH29 117 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 UBE2QL1A1L167 161 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 C12orf77C9JDV5 145 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 MCRIP1C9JLW8 97 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 PTGES3LE9PB15 166 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 IGLL1P15814 213 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 MGMTP16455 207 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 CD33P20138 364 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 GZMHP20718 246 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 RAB7AP51149 207 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 LOXL3P58215 753 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 GABPB1Q06547 395 aaPredicted RBP10.91□□□□□ -0.66
RAB40B-204ENST00000571554 GPR176Q14439 515 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 KPRPQ5T749 579 aaPredicted RBP10.91□□□□□ -0.66
RAB40B-204ENST00000571554 THNSL2Q86YJ6 484 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms