RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 DEFA6Q01524 100 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
USP43-202ENST00000570475 CRIP3Q6Q6R5 217 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 SELENOHQ8IZQ5 122 aaKnown RBP13.17□□□□□ -0.3
USP43-202ENST00000570475 ZNF610Q8N9Z0 462 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 GALNT14Q96FL9 552 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 RHOVQ96L33 236 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 ZNF552Q9H707 407 aaPredicted RBP13.17□□□□□ -0.3
USP43-202ENST00000570475 KIR2DS1A0A191URI9 304 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
USP43-202ENST00000570475 HEXAP06865 529 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 APLNRP35414 380 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 CD200P41217 278 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 KIR2DS4P43632 304 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 SAP25Q8TEE9 199 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
USP43-202ENST00000570475 SNX22Q96L94 193 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 DEFB127Q9H1M4 99 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 SLC39A9Q9NUM3 307 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 SLC22A20A6NK97 555 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 TOX3O15405 576 aaPredicted RBP13.16□□□□□ -0.3
USP43-202ENST00000570475 RRP8O43159 456 aaKnown RBP13.16□□□□□ -0.3
USP43-202ENST00000570475 OR8U8P0C7N1 319 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 VDAC1P21796 283 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 ZNF816Q0VGE8 651 aaPredicted RBP13.16□□□□□ -0.3
USP43-202ENST00000570475 COL19A1Q14993 1142 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 RIF1Q5UIP0 2472 aaKnown RBP13.16□□□□□ -0.3
USP43-202ENST00000570475 ZNF383Q8NA42 475 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 C18orf12Q96KH6 178 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 CABLES2Q9BTV7 478 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 UFSP2Q9NUQ7 469 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 CRIM1Q9NZV1 1036 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 ANAPC10Q9UM13 185 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 USF3Q68DE3 2245 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 SRD5A2P31213 254 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 PLA2G5P39877 138 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 WDR25Q64LD2 544 aaPredicted RBP13.16□□□□□ -0.3
USP43-202ENST00000570475 LHX4Q969G2 390 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 OR1A1Q9P1Q5 309 aa13.16□□□□□ -0.3
USP43-202ENST00000570475 ADAMTS9Q9P2N4 1935 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 hCG_38984A0A1B0GV85 526 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 RPL36A-HNRNPH2H7BZ11 118 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 HIKESHIQ53FT3 197 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 TMEM211Q6ICI0 200 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 CLDN23Q96B33 292 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 NXPH2O95156 264 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 CDS2O95674 445 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 CRYGSP22914 178 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 CTSSP25774 331 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 RFESDQ8TAC1 157 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 APH1AQ96BI3 265 aa13.15□□□□□ -0.3
USP43-202ENST00000570475 FOXD3Q9UJU5 478 aaPredicted RBP13.15□□□□□ -0.3
USP43-202ENST00000570475 KLF7O75840 302 aaPredicted RBP13.14□□□□□ -0.31
USP43-202ENST00000570475 DCAF12Q5T6F0 453 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 Q8WTZ3 238 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 SLC25A22Q9H936 323 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 LRP4O75096 1905 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 TMEM50AO95807 157 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 CXCL1P09341 107 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 HPSE2Q8WWQ2 592 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 IMMP1LQ96LU5 166 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 DEPPQ9NTK1 212 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 MTCH1Q9NZJ7 389 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 IGLV3-32A0A0A0MS00 114 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 MAGEA5P43359 124 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 IL11RAQ14626 422 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 GPR146Q96CH1 333 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 GGACTQ9BVM4 153 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 PCED1AQ9H1Q7 454 aa13.14□□□□□ -0.31
USP43-202ENST00000570475 PINLYPA6NC86 204 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 K7N7A8 449 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 RHBDL1O75783 438 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 HBE1P02100 147 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 HNF1AP20823 631 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 HLA-DRB3P79483 266 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 SPNS3Q6ZMD2 512 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 SSX9Q7RTT3 188 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 FAM210BQ96KR6 192 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 SMIM7Q9BQ49 75 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 VSIRQ9H7M9 311 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 BOKQ9UMX3 212 aaPredicted RBP13.13□□□□□ -0.31
USP43-202ENST00000570475 TTC28Q96AY4 2481 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 FOXI3A8MTJ6 420 aaPredicted RBP13.13□□□□□ -0.31
USP43-202ENST00000570475 DEFB108AA8MXU0 73 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 PHOX2AO14813 284 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 CEBPDP49716 269 aaPredicted RBP13.13□□□□□ -0.31
USP43-202ENST00000570475 SSC4DQ8WTU2 575 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 ADGRG7Q96K78 797 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 PROK2Q9HC23 129 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 RPRMQ9NS64 109 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 LYRM2Q9NU23 88 aaPredicted RBP13.13□□□□□ -0.31
USP43-202ENST00000570475 B4GALT7Q9UBV7 327 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 FZR1Q9UM11 496 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 A0A1W2PPQ1 181 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 LAMTOR5O43504 91 aa13.13□□□□□ -0.31
USP43-202ENST00000570475 PGLYRP1O75594 196 aaPredicted RBP13.13□□□□□ -0.31
USP43-202ENST00000570475 OTX1P32242 354 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms