RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SLC25A16P16260 332 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 HRH1P35367 487 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 FAUP35544 74 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 NPY4RP50391 375 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 GNB2P62879 340 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 ESCO2Q56NI9 601 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 RNASE10Q5GAN6 216 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 STEAP1BQ6NZ63 245 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 RAB39BQ96DA2 213 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 NCOR1P1Q9H4R4 102 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 C19orf12Q9NSK7 152 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 MBNL3Q9NUK0 354 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 ANXA10Q9UJ72 324 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 TBC1D24Q9ULP9 559 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 NOTCH2Q04721 2471 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 TRBV23-1A0A0A0MS06 115 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 IGHV4-61A0A0C4DH41 118 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 GPR37O15354 613 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 PMP2P02689 132 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 TBPP20226 339 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 OR3A3P47888 321 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 MEF2CQ06413 473 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 ASAH1Q13510 395 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 DYRK1AQ13627 763 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 HMGN3Q15651 99 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 FAAP20Q6NZ36 180 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 POC5Q8NA72 575 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 OR4C16Q8NGL9 310 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 UBALD1Q8TB05 177 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 C7orf50Q9BRJ6 194 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 TINAGL1Q9GZM7 467 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 TAF9BQ9HBM6 251 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 HRASLSQ9HDD0 168 aa12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-219ENST00000570273 CENPXA8MT69 81 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 C12orf77C9JDV5 145 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 PLA2G10O15496 165 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 PHF1O43189 567 aaPredicted RBP12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 CD74P04233 296 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 SCTP09683 121 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 GSTT2P0CG29 244 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 SSTR5P35346 364 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 MEF2DQ14814 521 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 CDK10Q15131 360 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 BTN2A1Q7KYR7 527 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 TCF23Q7RTU1 214 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 C5orf24Q7Z6I8 188 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 PRR18Q8N4B5 295 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 OR5AP2Q8NGF4 316 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 C11orf54Q9H0W9 315 aaPredicted RBP12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 MCUBQ9NWR8 336 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 EHFQ9NZC4 300 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 LINC00312Q9Y6C7 94 aa12.75□□□□□ -0.37
HERPUD1-219ENST00000570273 LYRM1O43325 122 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 HEXAP06865 529 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 LMO4P61968 165 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 ZNF273Q14593 569 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 ZNF554Q86TJ5 538 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 ZNF565Q8N9K5 539 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 OR4D10Q8NGI6 311 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 OR4A4PQ8NGN8 299 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 OR1L1Q8NH94 360 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 DEDD2Q8WXF8 326 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 ARL11Q969Q4 196 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 NECAP2Q9NVZ3 263 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 CALYQ9NYX4 217 aa12.74□□□□□ -0.37
HERPUD1-219ENST00000570273 NAP1L6A6NFF2 107 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 DISC1C4P0D8 188 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 SDCBPO00560 298 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 BET1O15155 118 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 SPINT2O43291 252 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 HBZP02008 142 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 AMY2AP04746 511 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 IFNA6P05013 189 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 GZMHP20718 246 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 IL2RGP31785 369 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 RFX2P48378 723 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 VAX1Q5SQQ9 334 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 MZT2BQ6NZ67 158 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 OR56B4Q8NH76 319 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 IL1F10Q8WWZ1 152 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 CORO2AQ92828 525 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 KIRREL1Q96J84 757 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 CABLES2Q9BTV7 478 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 RAB9BQ9NP90 201 aa12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 RPUSD1Q9UJJ7 312 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 UBE2J1Q9Y385 318 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-219ENST00000570273 LOC105371242A0A075B767 164 aa12.72□□□□□ -0.37
HERPUD1-219ENST00000570273 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-219ENST00000570273 C22orf46C9J442 243 aa12.72□□□□□ -0.37
HERPUD1-219ENST00000570273 C15orf65H3BRN8 121 aa12.72□□□□□ -0.37
HERPUD1-219ENST00000570273 CTXN2P0C2S0 81 aa12.72□□□□□ -0.37
HERPUD1-219ENST00000570273 USF1P22415 310 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-219ENST00000570273 HERPUD1Q15011 391 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms