RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TOLLIPQ9H0E2 274 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 TMEM222Q9H0R3 208 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 ARV1Q9H2C2 271 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CXXC4Q9H2H0 198 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 MS4A5Q9H3V2 200 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 BARX1Q9HBU1 254 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 MBNL3Q9NUK0 354 aaKnown RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 SDHAF2Q9NX18 166 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 OR5AC2Q9NZP5 309 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 PURGQ9UJV8 347 aaKnown RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 OR2W1Q9Y3N9 320 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 SLC25A15Q9Y619 301 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 LOC400499M0QZD8 3231 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CEP250Q9BV73 2442 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 IGHV2OR16-5A0A0B4J2B6 119 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 IGHV1-18A0A0C4DH31 117 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 C3orf85A0A1B0GTC6 90 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 KRBOX1C9JBD0 128 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 E5RGE8 158 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 IFNL4K9M1U5 179 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SLC33A1O00400 549 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 CDIPTO14735 213 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 HS3ST1O14792 307 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 PGLYRP1O75594 196 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 DEDDO75618 318 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 RHBDL1O75783 438 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 AGFG2O95081 481 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SPDEFO95238 335 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 HEXAP06865 529 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 OR5AC1P0C628 307 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 CECR9P0C854 216 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 FAM157CP0CG43 387 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 HKR1P10072 659 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SLC25A6P12236 298 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 TPT1P13693 172 aaKnown RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 MMP9P14780 707 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF250P15622 560 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 UCP1P25874 307 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 DUSP1P28562 367 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 LUMP51884 338 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 PAX5Q02548 391 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SNTB1Q13884 538 aaKnown RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ATXN7L3Q14CW9 347 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 HERPUD1Q15011 391 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 OR8G1Q15617 311 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 TSC22D1Q15714 1073 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 MSMO1Q15800 293 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 TMEM95Q3KNT9 176 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ALKBH6Q3KRA9 238 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SP6Q3SY56 376 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 TIMM23BQ5SRD1 257 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SPATA46Q5T0L3 261 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 C1orf185Q5T7R7 199 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SLC35E4Q6ICL7 350 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 EIF5AL1Q6IS14 154 aaKnown RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 CDPF1Q6NVV7 123 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF585AQ6P3V2 769 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF474Q6S9Z5 364 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 FIP1L1Q6UN15 594 aaKnown RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 LYZL2Q7Z4W2 148 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SPACA3Q8IXA5 215 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 CMTM1Q8IZ96 169 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SELENOHQ8IZQ5 122 aaKnown RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 FAM71E2Q8N5Q1 922 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF565Q8N9K5 539 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 BHLHE23Q8NDY6 225 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 OR10Z1Q8NGY1 313 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 TOMM40LQ969M1 308 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 SAT2Q96F10 170 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 AKR1E2Q96JD6 320 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF488Q96MN9 340 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF471Q9BX82 626 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 C11orf1Q9H5F2 150 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 GSKIPQ9P0R6 139 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 IL36RNQ9UBH0 155 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 GLS2Q9UI32 602 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 FBXO9Q9UK97 447 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-213ENST00000569687 NSG2Q9Y328 171 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 FAM215AQ9Y5M1 114 aa4.55□□□□□ -1.68
SF3B3-213ENST00000569687 ARHGAP21Q5T5U3 1957 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 MED12LQ86YW9 2145 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 IGKV1D-13A0A0B4J2D9 117 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 A0A1W2PR80 420 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 RAB19A4D1S5 217 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 MSGN1A6NI15 193 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 A8MXE2 369 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 H0Y980 276 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 MKRN2OSH3BPM6 223 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 I3L521 148 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 K7ENP7 123 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 K7EPK0 472 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 ST8SIA3O43173 380 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 PHF1O43189 567 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-213ENST00000569687 MLNRO43193 412 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 GPR137BO60478 399 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 JTBO76095 146 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 NXPH2O95156 264 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF205O95201 554 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 OR2H2O95918 312 aa4.54□□□□□ -1.68
SF3B3-213ENST00000569687 IGHV3-13P01766 116 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms